Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06415

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
1,318,054	-				-0.0
1,318,056	-				+1.0
1,318,095	+				+0.4
1,318,096	-				+0.2
1,318,397	-		ABIE41_RS06410	0.45	+0.6
1,318,649	-		ABIE41_RS06410	0.78	+1.1
1,318,867	+				-1.7
1,318,867	+				+1.5
1,318,867	+				-0.2
1,318,867	+				+0.9
1,318,867	+				+2.4
1,318,867	+				-1.9
1,318,867	+				+1.4
1,318,867	+				-0.0
1,318,868	-				+0.6
1,318,868	-				-0.1
1,318,868	-				-0.7
1,318,873	-				+2.0
1,318,935	+				+0.7
1,319,090	+				+1.0
1,319,090	+				+0.8
1,319,091	-				-0.3
1,319,091	-				-0.8
1,319,091	-				+0.4
1,319,091	-				-0.6
1,319,091	-				-1.1
1,319,091	-				-0.5
1,319,091	-				+0.3
1,319,148	+				-0.9
1,319,149	-				+0.0
1,319,303	+		ABIE41_RS06415	0.24	-0.5
1,319,303	+		ABIE41_RS06415	0.24	-0.4
1,319,303	+		ABIE41_RS06415	0.24	+0.2
1,319,303	+		ABIE41_RS06415	0.24	-0.6
1,319,303	+		ABIE41_RS06415	0.24	-2.3
1,319,303	+		ABIE41_RS06415	0.24	+0.4
1,319,304	-		ABIE41_RS06415	0.24	+0.2
1,319,304	-		ABIE41_RS06415	0.24	+1.3
1,319,618	+		ABIE41_RS06415	0.53	+0.9
1,319,618	+		ABIE41_RS06415	0.53	+1.9
1,319,618	+		ABIE41_RS06415	0.53	-0.5
1,319,619	-		ABIE41_RS06415	0.53	+0.4
1,319,619	-		ABIE41_RS06415	0.53	-0.7
1,319,619	-		ABIE41_RS06415	0.53	-0.4
1,319,619	-		ABIE41_RS06415	0.53	+1.6
1,319,619	-		ABIE41_RS06415	0.53	+0.3
1,319,619	-		ABIE41_RS06415	0.53	-0.5
1,319,717	+		ABIE41_RS06415	0.63	-0.3
1,319,717	+		ABIE41_RS06415	0.63	-0.8
1,319,717	+		ABIE41_RS06415	0.63	+1.0
1,319,717	+		ABIE41_RS06415	0.63	+0.2
1,319,717	+		ABIE41_RS06415	0.63	+1.0
1,319,717	+		ABIE41_RS06415	0.63	-0.4
1,319,718	-		ABIE41_RS06415	0.63	+0.3
1,320,060	+				-0.7
1,320,061	+				+0.3
1,320,061	+				-0.3
1,320,061	+				-1.8
1,320,061	+				+0.5
1,320,061	+				+0.2
1,320,062	-				+0.3
1,320,062	-				+0.9
1,320,062	-				-0.1
1,320,062	-				+0.1
1,320,062	-				+0.1
1,320,062	-				+0.2
1,320,062	-				-0.0
1,320,062	-				+0.8
1,320,062	-				+1.8
1,320,110	+				+0.6
1,320,110	+				-0.5
1,320,111	-				-2.4
1,320,158	+				-0.3
1,320,159	-				+0.8
1,320,159	-				+0.3
1,320,159	-				+1.0
1,320,159	-				-0.1
1,320,159	-				+0.7
1,320,159	-				+0.1
1,320,159	-				-1.7
1,320,550	+		ABIE41_RS06420	0.25	+0.2
1,320,550	+		ABIE41_RS06420	0.25	-1.5
1,320,551	-		ABIE41_RS06420	0.25	-1.8
1,320,607	+		ABIE41_RS06420	0.29	+1.8
1,320,622	+		ABIE41_RS06420	0.30	+0.9
1,320,622	+		ABIE41_RS06420	0.30	-0.8
1,320,622	+		ABIE41_RS06420	0.30	-0.6
1,320,623	-		ABIE41_RS06420	0.30	+0.1
1,320,623	-		ABIE41_RS06420	0.30	-0.5
1,320,623	-		ABIE41_RS06420	0.30	+1.1
1,320,623	-		ABIE41_RS06420	0.30	+0.2
1,320,623	-		ABIE41_RS06420	0.30	+0.7
1,320,623	-		ABIE41_RS06420	0.30	-1.3
1,320,624	-		ABIE41_RS06420	0.30	-0.4
1,320,652	+		ABIE41_RS06420	0.32	-0.1
1,320,652	+		ABIE41_RS06420	0.32	-2.7
1,320,652	+		ABIE41_RS06420	0.32	+0.2
1,320,652	+		ABIE41_RS06420	0.32	-0.4
1,320,652	+		ABIE41_RS06420	0.32	+0.6
1,320,652	+		ABIE41_RS06420	0.32	+0.1
1,320,652	+		ABIE41_RS06420	0.32	-2.3
1,320,653	-		ABIE41_RS06420	0.32	-0.2
1,320,653	-		ABIE41_RS06420	0.32	-0.3
1,320,653	-		ABIE41_RS06420	0.32	+0.3
1,320,653	-		ABIE41_RS06420	0.32	+0.4
1,320,706	+		ABIE41_RS06420	0.36	-0.6
1,320,715	+		ABIE41_RS06420	0.37	-0.9
1,320,715	+		ABIE41_RS06420	0.37	+0.8
1,320,715	+		ABIE41_RS06420	0.37	+0.0
1,320,715	+		ABIE41_RS06420	0.37	+0.2
1,320,715	+		ABIE41_RS06420	0.37	+0.0
1,320,716	-		ABIE41_RS06420	0.37	+0.8
1,320,716	-		ABIE41_RS06420	0.37	-0.5
1,320,716	-		ABIE41_RS06420	0.37	-0.9
1,320,716	-		ABIE41_RS06420	0.37	+0.0
1,320,859	+		ABIE41_RS06420	0.48	+0.6
1,320,859	+		ABIE41_RS06420	0.48	+0.7
1,320,860	-		ABIE41_RS06420	0.48	-0.1
1,320,860	-		ABIE41_RS06420	0.48	+0.9
1,320,860	-		ABIE41_RS06420	0.48	+0.1
1,320,860	-		ABIE41_RS06420	0.48	-0.3
1,320,860	-		ABIE41_RS06420	0.48	-1.4
1,320,860	-		ABIE41_RS06420	0.48	+1.3
1,320,860	-		ABIE41_RS06420	0.48	+0.6
1,320,865	+		ABIE41_RS06420	0.48	+0.7
1,320,865	+		ABIE41_RS06420	0.48	-0.0
1,320,866	-		ABIE41_RS06420	0.48	-0.6
1,320,866	-		ABIE41_RS06420	0.48	-1.2
1,320,955	+		ABIE41_RS06420	0.55	-0.7
1,320,955	+		ABIE41_RS06420	0.55	-1.0
1,320,955	+		ABIE41_RS06420	0.55	-1.0
1,320,956	-		ABIE41_RS06420	0.55	+0.0
1,320,970	+		ABIE41_RS06420	0.56	+0.7
1,320,971	-		ABIE41_RS06420	0.56	-0.2
1,321,072	+		ABIE41_RS06420	0.64	+0.4
1,321,072	+		ABIE41_RS06420	0.64	-0.5
1,321,072	+		ABIE41_RS06420	0.64	+0.1
1,321,072	+		ABIE41_RS06420	0.64	-0.2
1,321,072	+		ABIE41_RS06420	0.64	+1.2
1,321,073	-		ABIE41_RS06420	0.64	-0.1
1,321,073	-		ABIE41_RS06420	0.64	-1.1
1,321,073	-		ABIE41_RS06420	0.64	+0.2
1,321,073	-		ABIE41_RS06420	0.64	+0.2
1,321,073	-		ABIE41_RS06420	0.64	-0.7
1,321,073	-		ABIE41_RS06420	0.64	+0.5
1,321,073	-		ABIE41_RS06420	0.64	-0.4
1,321,073	-		ABIE41_RS06420	0.64	-0.3
1,321,075	-		ABIE41_RS06420	0.64	+0.1