Strain Fitness in Bosea sp. OAE506 around ABIE41_RS05265

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
1,090,021	+		ABIE41_RS05260	0.61	+0.2
1,090,021	+		ABIE41_RS05260	0.61	+0.1
1,090,022	-		ABIE41_RS05260	0.61	-0.2
1,090,022	-		ABIE41_RS05260	0.61	-0.2
1,090,022	-		ABIE41_RS05260	0.61	+0.0
1,090,022	-		ABIE41_RS05260	0.61	+1.0
1,090,022	-		ABIE41_RS05260	0.61	-2.0
1,090,022	-		ABIE41_RS05260	0.61	+0.2
1,090,061	-		ABIE41_RS05260	0.63	+0.2
1,090,061	-		ABIE41_RS05260	0.63	+2.3
1,090,112	-		ABIE41_RS05260	0.65	+0.1
1,090,112	-		ABIE41_RS05260	0.65	-0.7
1,090,112	-		ABIE41_RS05260	0.65	-0.1
1,090,112	-		ABIE41_RS05260	0.65	-1.6
1,090,300	+		ABIE41_RS05260	0.74	-0.9
1,090,300	+		ABIE41_RS05260	0.74	+0.1
1,090,360	+		ABIE41_RS05260	0.76	-1.4
1,090,361	-		ABIE41_RS05260	0.76	+2.6
1,090,366	+		ABIE41_RS05260	0.76	-2.9
1,090,366	+		ABIE41_RS05260	0.76	-1.1
1,090,367	-		ABIE41_RS05260	0.76	-0.5
1,090,367	-		ABIE41_RS05260	0.76	+0.5
1,090,367	-		ABIE41_RS05260	0.76	-0.7
1,090,423	+		ABIE41_RS05260	0.79	+0.4
1,090,424	-		ABIE41_RS05260	0.79	-0.3
1,090,534	+		ABIE41_RS05260	0.84	-0.2
1,090,535	-		ABIE41_RS05260	0.84	-1.5
1,090,535	-		ABIE41_RS05260	0.84	-0.6
1,090,561	+		ABIE41_RS05260	0.85	+0.4
1,090,561	+		ABIE41_RS05260	0.85	-0.1
1,090,562	-		ABIE41_RS05260	0.85	+0.6
1,090,562	-		ABIE41_RS05260	0.85	+0.1
1,090,744	+				-1.1
1,091,054	-		ABIE41_RS05265	0.14	-1.6
1,091,054	-		ABIE41_RS05265	0.14	+1.3
1,091,107	+		ABIE41_RS05265	0.20	+0.4
1,091,108	-		ABIE41_RS05265	0.20	-0.2
1,091,108	-		ABIE41_RS05265	0.20	+0.4
1,091,108	-		ABIE41_RS05265	0.20	-0.0
1,091,108	-		ABIE41_RS05265	0.20	+0.2
1,091,320	+		ABIE41_RS05265	0.43	-0.2
1,091,320	+		ABIE41_RS05265	0.43	-0.3
1,091,321	-		ABIE41_RS05265	0.43	+0.5
1,091,470	-		ABIE41_RS05265	0.60	+1.1
1,091,470	-		ABIE41_RS05265	0.60	-1.8
1,091,638	+		ABIE41_RS05265	0.79	+0.6
1,091,638	+		ABIE41_RS05265	0.79	-0.2
1,091,639	-		ABIE41_RS05265	0.79	+1.4
1,091,799	+				+0.7
1,091,800	-				-0.6
1,091,800	-				-1.7
1,091,875	-				-0.3
1,091,877	+				+0.6
1,091,878	-				+0.2
1,091,962	+				-0.5
1,091,962	+				-1.9
1,092,146	+		ABIE41_RS05270	0.33	-2.2
1,092,147	+		ABIE41_RS05270	0.33	+0.1
1,092,147	+		ABIE41_RS05270	0.33	-0.5
1,092,147	+		ABIE41_RS05270	0.33	+0.4
1,092,147	+		ABIE41_RS05270	0.33	+1.9
1,092,147	+		ABIE41_RS05270	0.33	-0.6
1,092,147	+		ABIE41_RS05270	0.33	+1.3
1,092,148	-		ABIE41_RS05270	0.33	+0.4
1,092,148	-		ABIE41_RS05270	0.33	-0.6
1,092,148	-		ABIE41_RS05270	0.33	+0.6
1,092,148	-		ABIE41_RS05270	0.33	-0.1
1,092,148	-		ABIE41_RS05270	0.33	+1.3
1,092,148	-		ABIE41_RS05270	0.33	+0.8
1,092,148	-		ABIE41_RS05270	0.33	+0.7
1,092,150	-		ABIE41_RS05270	0.33	+2.2
1,092,237	+		ABIE41_RS05270	0.47	+1.0
1,092,237	+		ABIE41_RS05270	0.47	+0.2
1,092,237	+		ABIE41_RS05270	0.47	+1.0
1,092,237	+		ABIE41_RS05270	0.47	+1.2
1,092,238	-		ABIE41_RS05270	0.47	-0.8
1,092,238	-		ABIE41_RS05270	0.47	+0.7
1,092,238	-		ABIE41_RS05270	0.47	+0.5
1,092,238	-		ABIE41_RS05270	0.47	+1.2
1,092,238	-		ABIE41_RS05270	0.47	-0.1
1,092,385	-		ABIE41_RS05270	0.71	+0.1
1,092,385	-		ABIE41_RS05270	0.71	+1.8
1,092,508	+				+1.4
1,092,508	+				-0.3
1,092,508	+				+0.7
1,092,508	+				+0.1
1,092,508	+				+1.4
1,092,508	+				+0.3
1,092,508	+				+1.3
1,092,508	+				+1.2
1,092,508	+				+1.8
1,092,509	-				+1.1
1,092,509	-				+0.1
1,092,509	-				+0.0
1,092,509	-				+1.2
1,092,509	-				+0.5
1,092,509	-				+0.3
1,092,635	+				+0.3