Strain Fitness in Bosea sp. OAE506 around ABIE41_RS00580

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
106,771	+				-2.9
106,771	+				+1.6
106,771	+				+0.2
106,771	+				-0.2
106,771	+				-1.4
106,771	+				-0.1
106,771	+				-0.2
106,771	+				+0.2
106,772	-				-0.3
106,772	-				+0.1
106,772	-				+0.2
106,772	-				-0.0
106,772	-				-0.8
106,772	-				-0.3
106,772	-				+1.1
106,772	-				+0.6
106,772	-				+1.1
106,772	-				+0.8
106,772	-				-0.0
106,772	-				-1.4
106,887	-		ABIE41_RS00570	0.67	-0.6
106,888	+		ABIE41_RS00570	0.68	-1.8
106,889	-		ABIE41_RS00570	0.68	-1.0
106,889	-		ABIE41_RS00570	0.68	-0.8
106,936	-				+2.0
106,936	-				+2.2
107,052	+		ABIE41_RS00575	0.16	+0.0
107,052	+		ABIE41_RS00575	0.16	+0.2
107,052	+		ABIE41_RS00575	0.16	-0.6
107,052	+		ABIE41_RS00575	0.16	-1.4
107,053	-		ABIE41_RS00575	0.16	-1.3
107,053	-		ABIE41_RS00575	0.16	+0.8
107,053	-		ABIE41_RS00575	0.16	+0.4
107,053	-		ABIE41_RS00575	0.16	+0.4
107,053	-		ABIE41_RS00575	0.16	+0.0
107,076	+		ABIE41_RS00575	0.19	+0.2
107,076	+		ABIE41_RS00575	0.19	+0.5
107,076	+		ABIE41_RS00575	0.19	+0.7
107,076	+		ABIE41_RS00575	0.19	-0.2
107,077	-		ABIE41_RS00575	0.20	+0.9
107,077	-		ABIE41_RS00575	0.20	-0.0
107,077	-		ABIE41_RS00575	0.20	+0.3
107,098	+		ABIE41_RS00575	0.23	-2.2
107,136	+		ABIE41_RS00575	0.29	-0.3
107,137	-		ABIE41_RS00575	0.29	+0.6
107,163	+		ABIE41_RS00575	0.33	-0.7
107,214	+		ABIE41_RS00575	0.41	+0.6
107,214	+		ABIE41_RS00575	0.41	+1.0
107,215	-		ABIE41_RS00575	0.41	-0.4
107,215	-		ABIE41_RS00575	0.41	-0.1
107,215	-		ABIE41_RS00575	0.41	-1.4
107,215	-		ABIE41_RS00575	0.41	+0.7
107,215	-		ABIE41_RS00575	0.41	-1.1
107,215	-		ABIE41_RS00575	0.41	-0.4
107,216	+		ABIE41_RS00575	0.42	-0.5
107,216	+		ABIE41_RS00575	0.42	-1.8
107,216	+		ABIE41_RS00575	0.42	+0.4
107,216	+		ABIE41_RS00575	0.42	+0.2
107,216	+		ABIE41_RS00575	0.42	+0.5
107,216	+		ABIE41_RS00575	0.42	+0.4
107,216	+		ABIE41_RS00575	0.42	+0.5
107,216	+		ABIE41_RS00575	0.42	-0.2
107,217	-		ABIE41_RS00575	0.42	-1.7
107,217	-		ABIE41_RS00575	0.42	-0.4
107,217	-		ABIE41_RS00575	0.42	-0.4
107,217	-		ABIE41_RS00575	0.42	-1.1
107,217	-		ABIE41_RS00575	0.42	+1.4
107,217	-		ABIE41_RS00575	0.42	-1.9
107,217	-		ABIE41_RS00575	0.42	-1.1
107,217	-		ABIE41_RS00575	0.42	-0.2
107,217	-		ABIE41_RS00575	0.42	+0.3
107,350	+		ABIE41_RS00575	0.63	+0.7
107,351	-		ABIE41_RS00575	0.63	-0.3
107,360	+		ABIE41_RS00575	0.64	+1.7
107,413	+		ABIE41_RS00575	0.73	-0.3
107,414	-		ABIE41_RS00575	0.73	-1.2
107,414	-		ABIE41_RS00575	0.73	-0.2
107,454	+		ABIE41_RS00575	0.79	-0.7
107,455	-		ABIE41_RS00575	0.80	-0.7
107,455	-		ABIE41_RS00575	0.80	+0.8
107,485	+		ABIE41_RS00575	0.84	+0.9
107,485	+		ABIE41_RS00575	0.84	+0.9
107,485	+		ABIE41_RS00575	0.84	+0.8
107,485	+		ABIE41_RS00575	0.84	-0.5
107,485	+		ABIE41_RS00575	0.84	-2.1
107,485	+		ABIE41_RS00575	0.84	-0.0
107,486	-		ABIE41_RS00575	0.84	+0.5
107,486	-		ABIE41_RS00575	0.84	-0.2
107,486	-		ABIE41_RS00575	0.84	+0.5
107,486	-		ABIE41_RS00575	0.84	-2.5
107,487	+		ABIE41_RS00575	0.85	+1.4
107,487	+		ABIE41_RS00575	0.85	-1.4
107,487	+		ABIE41_RS00575	0.85	-0.4
107,487	+		ABIE41_RS00575	0.85	-0.5
107,487	+		ABIE41_RS00575	0.85	+0.1
107,487	+		ABIE41_RS00575	0.85	-1.4
107,487	+		ABIE41_RS00575	0.85	-2.5
107,487	+		ABIE41_RS00575	0.85	-0.6
107,487	+		ABIE41_RS00575	0.85	+1.0
107,488	-		ABIE41_RS00575	0.85	-0.5
107,488	-		ABIE41_RS00575	0.85	+0.7
107,488	-		ABIE41_RS00575	0.85	-0.7
107,488	-		ABIE41_RS00575	0.85	-0.9
107,489	+		ABIE41_RS00575	0.85	+1.0
107,489	+		ABIE41_RS00575	0.85	+0.0
107,489	+		ABIE41_RS00575	0.85	-0.5
107,489	+		ABIE41_RS00575	0.85	-0.1
107,489	+		ABIE41_RS00575	0.85	+0.1
107,489	+		ABIE41_RS00575	0.85	+0.3
107,489	+		ABIE41_RS00575	0.85	+0.4
107,489	+		ABIE41_RS00575	0.85	-0.1
107,489	+		ABIE41_RS00575	0.85	-1.2
107,490	-		ABIE41_RS00575	0.85	-2.3
107,490	-		ABIE41_RS00575	0.85	-1.0
107,490	-		ABIE41_RS00575	0.85	+0.3
107,490	-		ABIE41_RS00575	0.85	+0.9
107,490	-		ABIE41_RS00575	0.85	-0.2
107,490	-		ABIE41_RS00575	0.85	+0.8
107,490	-		ABIE41_RS00575	0.85	+0.1
107,490	-		ABIE41_RS00575	0.85	-0.3
107,490	-		ABIE41_RS00575	0.85	-0.1
107,490	-		ABIE41_RS00575	0.85	-0.0
107,490	-		ABIE41_RS00575	0.85	+0.2
107,498	-		ABIE41_RS00575	0.86	-0.4
107,534	+				+0.6
107,534	+				-0.6
107,534	+				-0.5
107,534	+				-0.7
107,534	+				+1.5
107,534	+				-0.5
107,535	-				-0.5
107,535	-				-1.2
107,535	-				+0.5
107,731	+				-0.4
107,731	+				-2.3
107,731	+				-0.4
107,732	-				-0.3
107,745	-				-0.4
107,763	+				-1.8
107,763	+				+0.3
107,763	+				-0.6
107,763	+				-0.7
107,763	+				-1.2
107,763	+				-1.5
107,764	-				-0.9
107,796	+				+1.3
107,898	+		ABIE41_RS00580	0.18	+0.0
107,898	+		ABIE41_RS00580	0.18	+1.2
107,898	+		ABIE41_RS00580	0.18	-1.8
107,898	+		ABIE41_RS00580	0.18	-0.4
107,899	-		ABIE41_RS00580	0.18	-1.2
107,899	-		ABIE41_RS00580	0.18	+2.5
107,910	+		ABIE41_RS00580	0.19	+1.0
108,018	+		ABIE41_RS00580	0.32	-0.4
108,018	+		ABIE41_RS00580	0.32	+0.3
108,018	+		ABIE41_RS00580	0.32	-0.3
108,018	+		ABIE41_RS00580	0.32	-0.1
108,018	+		ABIE41_RS00580	0.32	+0.0
108,019	-		ABIE41_RS00580	0.32	+0.2
108,019	-		ABIE41_RS00580	0.32	+0.7
108,019	-		ABIE41_RS00580	0.32	-1.0
108,129	+		ABIE41_RS00580	0.44	-2.9
108,129	+		ABIE41_RS00580	0.44	-0.1
108,129	+		ABIE41_RS00580	0.44	-0.4
108,130	-		ABIE41_RS00580	0.44	+0.1
108,130	-		ABIE41_RS00580	0.44	-0.9
108,130	-		ABIE41_RS00580	0.44	-0.5
108,130	-		ABIE41_RS00580	0.44	-2.1
108,130	-		ABIE41_RS00580	0.44	+0.4
108,130	-		ABIE41_RS00580	0.44	+0.6
108,130	-		ABIE41_RS00580	0.44	-0.1
108,192	+		ABIE41_RS00580	0.51	+1.3
108,192	+		ABIE41_RS00580	0.51	-0.3
108,192	+		ABIE41_RS00580	0.51	-1.8
108,192	+		ABIE41_RS00580	0.51	+1.8
108,192	+		ABIE41_RS00580	0.51	+0.6
108,193	-		ABIE41_RS00580	0.51	-0.1
108,440	-		ABIE41_RS00580	0.80	-0.4
108,440	-		ABIE41_RS00580	0.80	-0.3
108,446	+		ABIE41_RS00580	0.80	-0.4
108,447	-		ABIE41_RS00580	0.80	-1.0
108,517	+		ABIE41_RS00580	0.88	-0.4
108,517	+		ABIE41_RS00580	0.88	-0.4
108,517	+		ABIE41_RS00580	0.88	+0.0
108,517	+		ABIE41_RS00580	0.88	+0.1
108,517	+		ABIE41_RS00580	0.88	+0.2
108,517	+		ABIE41_RS00580	0.88	-0.2
108,518	-		ABIE41_RS00580	0.88	-1.9
108,518	-		ABIE41_RS00580	0.88	+1.6
108,632	-				+0.4
108,690	+				+0.5
108,705	+				-1.5
108,705	+				+1.8
108,705	+				+1.5
108,706	-				-1.0
108,725	+				-0.0
108,725	+				-0.6
108,843	+		ABIE41_RS00585	0.19	+1.5
108,938	+		ABIE41_RS00585	0.28	+1.0
108,938	+		ABIE41_RS00585	0.28	+0.1
108,939	-		ABIE41_RS00585	0.28	-0.1
108,939	-		ABIE41_RS00585	0.28	-0.3
109,017	-		ABIE41_RS00585	0.36	+0.7
109,056	-		ABIE41_RS00585	0.40	+1.2
109,078	-		ABIE41_RS00585	0.42	-0.2
109,366	+		ABIE41_RS00585	0.70	-0.4
109,383	+		ABIE41_RS00585	0.72	-0.4
109,384	-		ABIE41_RS00585	0.72	-2.0
109,401	+		ABIE41_RS00585	0.74	-1.2
109,483	+		ABIE41_RS00585	0.82	-0.9
109,484	-		ABIE41_RS00585	0.82	-2.0
109,487	+		ABIE41_RS00585	0.82	+0.6
109,487	+		ABIE41_RS00585	0.82	+0.4
109,487	+		ABIE41_RS00585	0.82	-2.2
109,487	+		ABIE41_RS00585	0.82	-1.9
109,487	+		ABIE41_RS00585	0.82	-0.1
109,487	+		ABIE41_RS00585	0.82	+0.7
109,488	-		ABIE41_RS00585	0.82	-0.4
109,488	-		ABIE41_RS00585	0.82	-0.8
109,488	-		ABIE41_RS00585	0.82	-3.0