Strain Fitness in Bosea sp. OAE506 around ABIE41_RS20945

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
4,308,629	+		ABIE41_RS20940	0.33	+0.8
4,308,629	+		ABIE41_RS20940	0.33	-0.3
4,308,630	-		ABIE41_RS20940	0.33	+0.6
4,309,100	+		ABIE41_RS20940	0.67	-0.1
4,309,100	+		ABIE41_RS20940	0.67	-0.4
4,309,101	-		ABIE41_RS20940	0.67	-3.1
4,309,256	-		ABIE41_RS20940	0.78	+0.3
4,309,256	-		ABIE41_RS20940	0.78	+0.1
4,309,384	+		ABIE41_RS20940	0.88	+1.1
4,309,385	-		ABIE41_RS20940	0.88	-1.2
4,309,385	-		ABIE41_RS20940	0.88	-0.4
4,309,562	-				-0.2
4,309,562	-				-2.5
4,310,841	-				+0.8
4,310,997	+				+0.3
4,310,997	+				+0.8
4,310,997	+				-0.1
4,310,997	+				+2.3
4,310,997	+				+1.4
4,310,997	+				+0.6
4,310,997	+				+1.0
4,310,998	-				-2.4
4,310,998	-				+0.3
4,310,998	-				+1.1
4,310,998	-				+1.1
4,311,483	-		ABIE41_RS20950	0.50	+1.8
4,311,537	+		ABIE41_RS20950	0.56	-0.2
4,311,537	+		ABIE41_RS20950	0.56	+0.5
4,311,537	+		ABIE41_RS20950	0.56	-0.0
4,311,538	-		ABIE41_RS20950	0.56	-0.1
4,311,538	-		ABIE41_RS20950	0.56	+0.1
4,311,538	-		ABIE41_RS20950	0.56	+0.9
4,311,538	-		ABIE41_RS20950	0.56	-1.1
4,311,538	-		ABIE41_RS20950	0.56	+3.7
4,311,538	-		ABIE41_RS20950	0.56	+1.3
4,311,538	-		ABIE41_RS20950	0.56	+0.5
4,311,538	-		ABIE41_RS20950	0.56	+0.1
4,311,538	-		ABIE41_RS20950	0.56	-0.0
4,311,538	-		ABIE41_RS20950	0.56	+0.7
4,311,538	-		ABIE41_RS20950	0.56	+1.3