Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18680

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
3,846,027	+		ABIE41_RS18675	0.29	-0.5
3,846,027	+		ABIE41_RS18675	0.29	-2.1
3,846,027	+		ABIE41_RS18675	0.29	-2.7
3,846,027	+		ABIE41_RS18675	0.29	+0.1
3,846,027	+		ABIE41_RS18675	0.29	-0.1
3,846,027	+		ABIE41_RS18675	0.29	+1.3
3,846,027	+		ABIE41_RS18675	0.29	+0.5
3,846,027	+		ABIE41_RS18675	0.29	+0.9
3,846,027	+		ABIE41_RS18675	0.29	+0.2
3,846,027	+		ABIE41_RS18675	0.29	-2.1
3,846,027	+		ABIE41_RS18675	0.29	-0.8
3,846,028	-		ABIE41_RS18675	0.29	-0.1
3,846,028	-		ABIE41_RS18675	0.29	-2.5
3,846,028	-		ABIE41_RS18675	0.29	-0.7
3,846,028	-		ABIE41_RS18675	0.29	-0.2
3,846,028	-		ABIE41_RS18675	0.29	-1.2
3,846,028	-		ABIE41_RS18675	0.29	+0.1
3,846,028	-		ABIE41_RS18675	0.29	-0.6
3,846,138	+		ABIE41_RS18675	0.40	+0.2
3,846,138	+		ABIE41_RS18675	0.40	+0.2
3,846,139	-		ABIE41_RS18675	0.40	-1.3
3,846,139	-		ABIE41_RS18675	0.40	+0.3
3,846,139	-		ABIE41_RS18675	0.40	-1.3
3,846,139	-		ABIE41_RS18675	0.40	-0.1
3,846,403	-		ABIE41_RS18675	0.66	+0.1
3,846,487	+		ABIE41_RS18675	0.75	-1.8
3,846,487	+		ABIE41_RS18675	0.75	-0.4
3,846,487	+		ABIE41_RS18675	0.75	-1.2
3,846,488	-		ABIE41_RS18675	0.75	-0.2
3,846,541	+		ABIE41_RS18675	0.80	-2.1
3,846,541	+		ABIE41_RS18675	0.80	-0.3
3,847,082	+		ABIE41_RS18680	0.27	+0.6
3,847,130	-		ABIE41_RS18680	0.34	-0.3
3,847,190	+		ABIE41_RS18680	0.42	-0.7
3,847,191	-		ABIE41_RS18680	0.42	+0.2
3,847,232	+		ABIE41_RS18680	0.47	+0.8
3,847,232	+		ABIE41_RS18680	0.47	-0.9
3,847,233	-		ABIE41_RS18680	0.47	+0.8
3,847,233	-		ABIE41_RS18680	0.47	+0.7
3,847,560	+				-1.5
3,847,560	+				-2.3
3,847,561	-				+1.8
3,847,561	-				-0.6
3,847,561	-				+0.3
3,847,611	+				-2.0
3,848,134	+		ABIE41_RS18685	0.51	-1.0
3,848,135	-		ABIE41_RS18685	0.51	-0.9
3,848,135	-		ABIE41_RS18685	0.51	+0.1
3,848,135	-		ABIE41_RS18685	0.51	-1.4
3,848,338	+		ABIE41_RS18685	0.82	-0.3
3,848,338	+		ABIE41_RS18685	0.82	-0.6
3,848,338	+		ABIE41_RS18685	0.82	+0.5
3,848,338	+		ABIE41_RS18685	0.82	-1.4
3,848,339	-		ABIE41_RS18685	0.82	-0.4
3,848,434	+				-0.2
3,848,434	+				+0.1
3,848,435	-				+1.0
3,848,435	-				+3.1
3,848,435	-				+0.3
3,848,436	-				-1.7
3,848,514	-				+0.4
3,848,539	+				-0.2
3,848,540	-				-1.0