Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18565

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
3,821,460	+		ABIE41_RS18560	0.62	+0.2
3,821,461	-		ABIE41_RS18560	0.62	-0.1
3,821,566	-		ABIE41_RS18560	0.66	-0.8
3,821,673	+		ABIE41_RS18560	0.70	-2.4
3,821,673	+		ABIE41_RS18560	0.70	-0.5
3,821,674	-		ABIE41_RS18560	0.71	+0.5
3,821,730	+		ABIE41_RS18560	0.73	-1.0
3,821,730	+		ABIE41_RS18560	0.73	+2.8
3,821,730	+		ABIE41_RS18560	0.73	-0.3
3,821,731	-		ABIE41_RS18560	0.73	+0.0
3,821,913	+		ABIE41_RS18560	0.81	+0.2
3,821,913	+		ABIE41_RS18560	0.81	-2.1
3,821,914	-		ABIE41_RS18560	0.81	-0.3
3,822,068	+		ABIE41_RS18560	0.87	-2.7
3,822,095	+		ABIE41_RS18560	0.88	+2.1
3,822,095	+		ABIE41_RS18560	0.88	+1.0
3,822,095	+		ABIE41_RS18560	0.88	+0.1
3,822,095	+		ABIE41_RS18560	0.88	+0.2
3,822,095	+		ABIE41_RS18560	0.88	+1.3
3,822,095	+		ABIE41_RS18560	0.88	-0.1
3,822,096	-		ABIE41_RS18560	0.88	+0.1
3,822,096	-		ABIE41_RS18560	0.88	+0.9
3,822,302	-				+0.6
3,822,302	-				+0.5
3,822,416	+				+0.3
3,822,416	+				+0.5
3,822,416	+				+1.0
3,822,416	+				-1.2
3,822,416	+				+0.3
3,822,417	-				-1.1
3,822,417	-				+0.6
3,822,417	-				+0.3
3,822,417	-				+0.6
3,822,417	-				-1.7
3,822,417	-				+0.1
3,822,417	-				-0.2
3,822,417	-				+0.3
3,822,420	-				+0.2
3,822,420	-				-0.5
3,822,420	-				+1.9
3,822,455	-				-0.7
3,822,614	+		ABIE41_RS18565	0.13	-1.1
3,822,614	+		ABIE41_RS18565	0.13	-1.3
3,822,640	-		ABIE41_RS18565	0.14	+0.4
3,822,789	+		ABIE41_RS18565	0.25	+0.7
3,822,789	+		ABIE41_RS18565	0.25	-0.3
3,822,790	-		ABIE41_RS18565	0.25	-2.9
3,822,809	+		ABIE41_RS18565	0.26	-0.7
3,823,032	-		ABIE41_RS18565	0.42	+0.8
3,823,032	-		ABIE41_RS18565	0.42	-0.2
3,823,037	-		ABIE41_RS18565	0.42	-1.8
3,823,427	+		ABIE41_RS18565	0.70	+0.2
3,823,427	+		ABIE41_RS18565	0.70	-0.1
3,823,552	+		ABIE41_RS18565	0.79	-0.7
3,823,712	+		ABIE41_RS18565	0.90	-0.1
3,823,712	+		ABIE41_RS18565	0.90	+0.2
3,823,713	-				-0.6
3,823,713	-				-0.5
3,823,713	-				+0.3
3,823,847	+				+0.0
3,823,848	-				-1.7
3,823,848	-				+1.7
3,823,848	-				+0.9
3,823,881	+				+0.1
3,823,881	+				-0.2
3,823,881	+				+0.1
3,823,881	+				+0.5
3,823,882	-				+0.5
3,823,882	-				+0.3
3,823,882	-				+0.5
3,823,882	-				-0.1
3,824,133	+		ABIE41_RS18570	0.37	-0.3
3,824,134	-		ABIE41_RS18570	0.37	+0.4
3,824,239	-		ABIE41_RS18570	0.52	+1.1
3,824,395	+		ABIE41_RS18570	0.73	-0.0
3,824,395	+		ABIE41_RS18570	0.73	-1.5
3,824,395	+		ABIE41_RS18570	0.73	-0.2
3,824,395	+		ABIE41_RS18570	0.73	+0.3
3,824,395	+		ABIE41_RS18570	0.73	-0.2
3,824,395	+		ABIE41_RS18570	0.73	+0.6
3,824,396	-		ABIE41_RS18570	0.73	+1.4
3,824,396	-		ABIE41_RS18570	0.73	+0.8
3,824,396	-		ABIE41_RS18570	0.73	-0.3