Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18210

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
3,748,284	+		ABIE41_RS18205	0.18	+0.6
3,748,362	+		ABIE41_RS18205	0.24	-0.1
3,748,362	+		ABIE41_RS18205	0.24	+0.1
3,748,362	+		ABIE41_RS18205	0.24	+0.5
3,748,362	+		ABIE41_RS18205	0.24	-0.3
3,748,363	-		ABIE41_RS18205	0.24	+0.4
3,748,363	-		ABIE41_RS18205	0.24	-0.1
3,748,393	-		ABIE41_RS18205	0.27	-0.1
3,748,413	+		ABIE41_RS18205	0.28	-1.6
3,748,416	+		ABIE41_RS18205	0.28	-0.0
3,748,417	-		ABIE41_RS18205	0.29	-2.3
3,748,614	+		ABIE41_RS18205	0.45	+0.6
3,748,668	+		ABIE41_RS18205	0.49	+1.5
3,748,669	-		ABIE41_RS18205	0.49	-0.0
3,748,669	-		ABIE41_RS18205	0.49	+0.5
3,748,805	-		ABIE41_RS18205	0.61	-1.0
3,748,815	+		ABIE41_RS18205	0.61	+0.1
3,748,815	+		ABIE41_RS18205	0.61	-0.0
3,748,816	-		ABIE41_RS18205	0.61	+0.2
3,748,852	-		ABIE41_RS18205	0.64	-0.2
3,748,936	-		ABIE41_RS18205	0.71	+1.0
3,748,936	-		ABIE41_RS18205	0.71	+1.0
3,748,978	-		ABIE41_RS18205	0.75	+0.8
3,749,034	+		ABIE41_RS18205	0.79	+0.6
3,749,053	-		ABIE41_RS18205	0.81	-0.7
3,749,304	+				+0.1
3,749,304	+				+0.7
3,749,305	-				-1.1
3,749,305	-				+0.4
3,749,382	-		ABIE41_RS18210	0.13	+0.7
3,749,467	+		ABIE41_RS18210	0.24	+0.3
3,749,468	-		ABIE41_RS18210	0.24	+1.3
3,749,468	-		ABIE41_RS18210	0.24	-1.4
3,749,511	+		ABIE41_RS18210	0.29	+1.1
3,749,774	-		ABIE41_RS18210	0.62	-0.0
3,749,860	+		ABIE41_RS18210	0.72	-0.0
3,749,860	+		ABIE41_RS18210	0.72	+1.3
3,749,860	+		ABIE41_RS18210	0.72	+0.2
3,749,861	-		ABIE41_RS18210	0.72	+0.3
3,749,861	-		ABIE41_RS18210	0.72	-0.2
3,750,156	-				-0.2
3,750,156	-				+1.4
3,750,208	+		ABIE41_RS18215	0.14	+2.1
3,750,209	-		ABIE41_RS18215	0.15	-0.4
3,750,215	+		ABIE41_RS18215	0.16	+0.0
3,750,215	+		ABIE41_RS18215	0.16	+0.2
3,750,216	-		ABIE41_RS18215	0.16	+0.4
3,750,216	-		ABIE41_RS18215	0.16	-0.3
3,750,904	-		ABIE41_RS18220	0.85	-0.9
3,751,078	+		ABIE41_RS18225	0.17	-0.7
3,751,078	+		ABIE41_RS18225	0.17	-0.2
3,751,079	-		ABIE41_RS18225	0.17	-0.9