Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18200

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
3,746,357	+		ABIE41_RS18190	0.74	-1.9
3,746,357	+		ABIE41_RS18190	0.74	-0.7
3,746,453	+		ABIE41_RS18190	0.85	+1.3
3,746,453	+		ABIE41_RS18190	0.85	-0.3
3,746,453	+		ABIE41_RS18190	0.85	-0.5
3,746,453	+		ABIE41_RS18190	0.85	-0.3
3,746,453	+		ABIE41_RS18190	0.85	-0.3
3,746,454	-		ABIE41_RS18190	0.86	-1.2
3,746,611	-				+1.8
3,746,894	+		ABIE41_RS18195	0.15	-2.8
3,746,894	+		ABIE41_RS18195	0.15	-1.2
3,746,895	-		ABIE41_RS18195	0.15	-0.3
3,746,903	+		ABIE41_RS18195	0.17	-0.9
3,746,903	+		ABIE41_RS18195	0.17	-0.4
3,746,903	+		ABIE41_RS18195	0.17	+0.1
3,746,903	+		ABIE41_RS18195	0.17	-0.2
3,746,903	+		ABIE41_RS18195	0.17	-0.0
3,746,903	+		ABIE41_RS18195	0.17	+0.4
3,746,903	+		ABIE41_RS18195	0.17	+0.3
3,746,903	+		ABIE41_RS18195	0.17	+0.1
3,746,904	-		ABIE41_RS18195	0.17	-0.5
3,747,826	+		ABIE41_RS18200	0.68	-2.2
3,747,826	+		ABIE41_RS18200	0.68	+1.2
3,747,826	+		ABIE41_RS18200	0.68	+0.4
3,747,827	-		ABIE41_RS18200	0.68	+1.7
3,747,833	-		ABIE41_RS18200	0.69	+1.7
3,748,284	+		ABIE41_RS18205	0.18	+0.6
3,748,362	+		ABIE41_RS18205	0.24	-0.1
3,748,362	+		ABIE41_RS18205	0.24	+0.1
3,748,362	+		ABIE41_RS18205	0.24	+0.5
3,748,362	+		ABIE41_RS18205	0.24	-0.3
3,748,363	-		ABIE41_RS18205	0.24	+0.4
3,748,363	-		ABIE41_RS18205	0.24	-0.1
3,748,393	-		ABIE41_RS18205	0.27	-0.1
3,748,413	+		ABIE41_RS18205	0.28	-1.6
3,748,416	+		ABIE41_RS18205	0.28	-0.0
3,748,417	-		ABIE41_RS18205	0.29	-2.3
3,748,614	+		ABIE41_RS18205	0.45	+0.6
3,748,668	+		ABIE41_RS18205	0.49	+1.5
3,748,669	-		ABIE41_RS18205	0.49	-0.0
3,748,669	-		ABIE41_RS18205	0.49	+0.5
3,748,805	-		ABIE41_RS18205	0.61	-1.0
3,748,815	+		ABIE41_RS18205	0.61	+0.1
3,748,815	+		ABIE41_RS18205	0.61	-0.0
3,748,816	-		ABIE41_RS18205	0.61	+0.2
3,748,852	-		ABIE41_RS18205	0.64	-0.2
3,748,936	-		ABIE41_RS18205	0.71	+1.0
3,748,936	-		ABIE41_RS18205	0.71	+1.0
3,748,978	-		ABIE41_RS18205	0.75	+0.8
3,749,034	+		ABIE41_RS18205	0.79	+0.6
3,749,053	-		ABIE41_RS18205	0.81	-0.7