Strain Fitness in Bosea sp. OAE506 around ABIE41_RS13640

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,800,245	-		ABIE41_RS13635	0.27	-1.9
2,800,256	+		ABIE41_RS13635	0.28	-0.4
2,800,256	+		ABIE41_RS13635	0.28	+0.0
2,800,257	-		ABIE41_RS13635	0.28	+3.1
2,800,257	-		ABIE41_RS13635	0.28	-0.4
2,800,257	-		ABIE41_RS13635	0.28	+0.6
2,800,257	-		ABIE41_RS13635	0.28	-2.4
2,800,257	-		ABIE41_RS13635	0.28	+0.4
2,800,257	-		ABIE41_RS13635	0.28	-1.4
2,800,406	+		ABIE41_RS13635	0.45	-0.9
2,800,407	-		ABIE41_RS13635	0.45	-0.6
2,800,407	-		ABIE41_RS13635	0.45	-2.2
2,800,407	-		ABIE41_RS13635	0.45	-1.6
2,800,461	-		ABIE41_RS13635	0.51	-0.3
2,800,478	+		ABIE41_RS13635	0.52	-0.6
2,800,478	+		ABIE41_RS13635	0.52	-1.1
2,800,479	-		ABIE41_RS13635	0.53	-0.1
2,800,842	-				-1.6
2,801,001	+				-0.7
2,801,002	-				+0.3
2,801,039	+				-2.8
2,801,265	+				-1.4
2,801,265	+				+0.3
2,801,265	+				+0.3
2,801,266	-				-1.1
2,801,482	-		ABIE41_RS13640	0.28	+0.0
2,801,534	+		ABIE41_RS13640	0.33	-3.1
2,801,534	+		ABIE41_RS13640	0.33	-0.2
2,801,534	+		ABIE41_RS13640	0.33	-1.5
2,801,534	+		ABIE41_RS13640	0.33	-3.1
2,801,535	-		ABIE41_RS13640	0.33	-0.1
2,801,535	-		ABIE41_RS13640	0.33	-2.3
2,801,535	-		ABIE41_RS13640	0.33	-0.0
2,801,535	-		ABIE41_RS13640	0.33	-2.6
2,801,586	+		ABIE41_RS13640	0.38	-1.1
2,801,586	+		ABIE41_RS13640	0.38	+0.1
2,801,587	-		ABIE41_RS13640	0.38	-0.1
2,801,587	-		ABIE41_RS13640	0.38	-0.1
2,801,587	-		ABIE41_RS13640	0.38	+0.3
2,801,587	-		ABIE41_RS13640	0.38	-0.4
2,801,587	-		ABIE41_RS13640	0.38	-1.8
2,801,587	-		ABIE41_RS13640	0.38	-1.8
2,801,587	-		ABIE41_RS13640	0.38	-0.4
2,801,610	-		ABIE41_RS13640	0.41	-0.1
2,801,691	+		ABIE41_RS13640	0.49	-3.5
2,801,691	+		ABIE41_RS13640	0.49	-0.4
2,801,692	-		ABIE41_RS13640	0.49	-0.8
2,801,706	+		ABIE41_RS13640	0.50	+2.0
2,801,707	-		ABIE41_RS13640	0.50	+0.1
2,801,707	-		ABIE41_RS13640	0.50	+0.8
2,801,707	-		ABIE41_RS13640	0.50	+0.6
2,801,772	+		ABIE41_RS13640	0.57	-0.8
2,801,772	+		ABIE41_RS13640	0.57	-0.3
2,801,773	-		ABIE41_RS13640	0.57	+0.2
2,801,773	-		ABIE41_RS13640	0.57	+0.3
2,801,773	-		ABIE41_RS13640	0.57	-1.4
2,801,773	-		ABIE41_RS13640	0.57	-0.4
2,801,773	-		ABIE41_RS13640	0.57	+0.1
2,801,773	-		ABIE41_RS13640	0.57	+0.1
2,801,773	-		ABIE41_RS13640	0.57	-0.1
2,801,808	+		ABIE41_RS13640	0.60	+0.7
2,801,808	+		ABIE41_RS13640	0.60	-0.3
2,801,808	+		ABIE41_RS13640	0.60	-0.0
2,801,808	+		ABIE41_RS13640	0.60	-1.1
2,801,808	+		ABIE41_RS13640	0.60	+0.3
2,801,808	+		ABIE41_RS13640	0.60	-1.1
2,801,809	-		ABIE41_RS13640	0.60	+0.1
2,801,826	+		ABIE41_RS13640	0.62	-0.6
2,801,826	+		ABIE41_RS13640	0.62	+0.3
2,801,827	-		ABIE41_RS13640	0.62	+0.4
2,801,827	-		ABIE41_RS13640	0.62	+0.2
2,802,009	+		ABIE41_RS13640	0.80	-0.1
2,802,364	-		ABIE41_RS13645	0.10	+0.9
2,802,364	-		ABIE41_RS13645	0.10	-0.5
2,802,616	+		ABIE41_RS13645	0.31	+0.2
2,802,616	+		ABIE41_RS13645	0.31	+0.4
2,802,660	+		ABIE41_RS13645	0.34	+0.8
2,802,661	-		ABIE41_RS13645	0.34	-0.5
2,802,805	+		ABIE41_RS13645	0.46	-1.4
2,802,806	-		ABIE41_RS13645	0.46	-0.2
2,803,059	+		ABIE41_RS13645	0.67	-2.6
2,803,059	+		ABIE41_RS13645	0.67	+0.4
2,803,059	+		ABIE41_RS13645	0.67	-0.4
2,803,060	-		ABIE41_RS13645	0.67	-0.4
2,803,060	-		ABIE41_RS13645	0.67	+1.2
2,803,060	-		ABIE41_RS13645	0.67	-0.9
2,803,060	-		ABIE41_RS13645	0.67	+0.6
2,803,081	+		ABIE41_RS13645	0.68	+0.0
2,803,173	+		ABIE41_RS13645	0.76	+0.0
2,803,173	+		ABIE41_RS13645	0.76	-0.4
2,803,173	+		ABIE41_RS13645	0.76	+0.6
2,803,173	+		ABIE41_RS13645	0.76	-2.7
2,803,174	-		ABIE41_RS13645	0.76	+0.1
2,803,174	-		ABIE41_RS13645	0.76	-2.1
2,803,174	-		ABIE41_RS13645	0.76	-0.3
2,803,174	-		ABIE41_RS13645	0.76	-1.3
2,803,174	-		ABIE41_RS13645	0.76	+0.7
2,803,174	-		ABIE41_RS13645	0.76	+0.1