Strain Fitness in Bosea sp. OAE506 around ABIE41_RS11305

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,324,130	-		ABIE41_RS11300	0.19	+0.5
2,324,130	-		ABIE41_RS11300	0.19	-2.1
2,324,146	+		ABIE41_RS11300	0.22	-2.7
2,324,146	+		ABIE41_RS11300	0.22	-0.7
2,324,201	-		ABIE41_RS11300	0.35	-3.4
2,324,237	+		ABIE41_RS11300	0.43	-0.6
2,324,237	+		ABIE41_RS11300	0.43	-0.3
2,324,266	+		ABIE41_RS11300	0.49	+0.5
2,324,355	+		ABIE41_RS11300	0.69	-4.6
2,324,356	-		ABIE41_RS11300	0.69	+0.3
2,324,429	+		ABIE41_RS11300	0.86	+0.1
2,324,429	+		ABIE41_RS11300	0.86	+0.2
2,324,429	+		ABIE41_RS11300	0.86	-0.5
2,324,430	-		ABIE41_RS11300	0.86	-1.4
2,324,430	-		ABIE41_RS11300	0.86	-0.9
2,324,452	+				-0.5
2,324,453	-				+0.4
2,324,483	+				-1.3
2,324,492	+				+0.2
2,324,493	-				+1.4
2,324,493	-				+0.8
2,324,493	-				-0.1
2,324,624	+		ABIE41_RS11305	0.61	-1.9
2,324,625	-		ABIE41_RS11305	0.62	-1.8
2,324,633	-		ABIE41_RS11305	0.65	+0.1
2,324,931	+		ABIE41_RS11310	0.12	+1.9
2,324,931	+		ABIE41_RS11310	0.12	+0.6
2,324,931	+		ABIE41_RS11310	0.12	-0.6
2,324,932	-		ABIE41_RS11310	0.13	+0.7
2,325,023	-		ABIE41_RS11310	0.28	+1.0
2,325,023	-		ABIE41_RS11310	0.28	+1.5
2,325,269	-		ABIE41_RS11310	0.69	-2.4
2,325,447	+				+0.5
2,325,449	-				-1.2
2,325,641	+				-0.4
2,325,641	+				+0.2
2,325,642	-				-0.2
2,325,642	-				+1.1
2,325,705	-		ABIE41_RS11315	0.20	+0.8