Strain Fitness in Bosea sp. OAE506 around ABIE41_RS10305

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,118,561	+		ABIE41_RS10295	0.76	-1.8
2,118,561	+		ABIE41_RS10295	0.76	-0.4
2,118,562	-		ABIE41_RS10295	0.76	-0.2
2,118,680	+		ABIE41_RS10295	0.88	+0.5
2,118,680	+		ABIE41_RS10295	0.88	-0.1
2,118,681	-		ABIE41_RS10295	0.88	+1.2
2,118,803	+				-0.9
2,118,803	+				-0.1
2,118,804	-				+0.1
2,118,842	+				-0.0
2,118,843	-				+0.0
2,118,881	+		ABIE41_RS10300	0.19	-1.6
2,118,932	+		ABIE41_RS10300	0.31	-0.5
2,118,932	+		ABIE41_RS10300	0.31	-0.1
2,118,933	-		ABIE41_RS10300	0.32	+0.7
2,118,947	+		ABIE41_RS10300	0.35	+0.6
2,118,948	-		ABIE41_RS10300	0.35	-0.6
2,119,064	+		ABIE41_RS10300	0.63	+1.1
2,119,064	+		ABIE41_RS10300	0.63	-2.5
2,119,064	+		ABIE41_RS10300	0.63	-0.5
2,119,065	-		ABIE41_RS10300	0.64	-0.5
2,119,065	-		ABIE41_RS10300	0.64	-0.8
2,119,065	-		ABIE41_RS10300	0.64	+0.3
2,119,197	-				+2.4
2,119,197	-				-1.2
2,119,197	-				-0.1
2,119,243	+				+0.4
2,119,243	+				-0.1
2,119,244	-				+0.1
2,119,244	-				+1.1
2,119,323	+				+1.5
2,119,323	+				-0.3
2,119,324	-				+1.1
2,119,324	-				+0.7
2,119,324	-				-0.1
2,119,442	+				+0.5
2,119,442	+				+0.6
2,119,443	-				+0.3
2,119,493	+				+0.1
2,119,493	+				+0.4
2,119,493	+				+1.6
2,119,494	-				-0.1
2,119,494	-				-0.3
2,119,494	-				-2.4
2,119,867	+		ABIE41_RS10305	0.35	+0.4
2,119,867	+		ABIE41_RS10305	0.35	-2.5
2,119,867	+		ABIE41_RS10305	0.35	+2.3
2,119,868	-		ABIE41_RS10305	0.35	-0.3
2,119,888	+		ABIE41_RS10305	0.37	-2.1
2,119,889	-		ABIE41_RS10305	0.37	+0.4
2,119,889	-		ABIE41_RS10305	0.37	-1.5
2,119,889	-		ABIE41_RS10305	0.37	-0.9
2,119,889	-		ABIE41_RS10305	0.37	-1.0
2,119,918	+		ABIE41_RS10305	0.39	-0.2
2,119,919	-		ABIE41_RS10305	0.39	-0.4
2,119,933	+		ABIE41_RS10305	0.40	+0.6
2,119,934	-		ABIE41_RS10305	0.40	-1.2
2,120,122	+		ABIE41_RS10305	0.55	+0.5
2,120,122	+		ABIE41_RS10305	0.55	+0.4
2,120,123	-		ABIE41_RS10305	0.55	+0.8
2,120,123	-		ABIE41_RS10305	0.55	-0.1
2,120,185	+		ABIE41_RS10305	0.60	+0.2
2,120,185	+		ABIE41_RS10305	0.60	+1.0
2,120,267	-		ABIE41_RS10305	0.67	+0.4
2,120,353	+		ABIE41_RS10305	0.74	+0.8
2,120,354	-		ABIE41_RS10305	0.74	-0.2
2,120,383	+		ABIE41_RS10305	0.76	+0.8
2,120,383	+		ABIE41_RS10305	0.76	+2.1
2,120,383	+		ABIE41_RS10305	0.76	+0.3
2,120,383	+		ABIE41_RS10305	0.76	-2.1
2,120,383	+		ABIE41_RS10305	0.76	-2.1
2,120,383	+		ABIE41_RS10305	0.76	+0.4
2,120,383	+		ABIE41_RS10305	0.76	+0.3
2,120,384	-		ABIE41_RS10305	0.76	+0.4
2,120,384	-		ABIE41_RS10305	0.76	-0.4
2,120,384	-		ABIE41_RS10305	0.76	-1.4
2,120,384	-		ABIE41_RS10305	0.76	-0.3
2,120,384	-		ABIE41_RS10305	0.76	-0.3
2,120,486	-		ABIE41_RS10305	0.84	+0.2
2,120,587	+				-1.5
2,120,587	+				-0.5
2,120,587	+				-0.0
2,120,588	-				+0.6
2,120,588	-				-0.1
2,120,588	-				-0.1
2,120,596	+				+0.3
2,120,597	-				+0.0
2,120,597	-				+0.2
2,120,707	+				+0.1
2,120,773	-				-0.7
2,121,193	-		ABIE41_RS10310	0.14	-0.1
2,121,258	+		ABIE41_RS10310	0.15	+2.2
2,121,258	+		ABIE41_RS10310	0.15	+0.6
2,121,576	+		ABIE41_RS10310	0.24	+0.1
2,121,577	-		ABIE41_RS10310	0.24	+0.4
2,121,612	+		ABIE41_RS10310	0.25	-0.3
2,121,612	+		ABIE41_RS10310	0.25	-0.1
2,121,613	-		ABIE41_RS10310	0.25	-1.3
2,121,613	-		ABIE41_RS10310	0.25	-1.8
2,121,613	-		ABIE41_RS10310	0.25	+0.0
2,121,651	+		ABIE41_RS10310	0.26	+1.6
2,121,652	-		ABIE41_RS10310	0.27	-3.1