Strain Fitness in Bosea sp. OAE506 around ABIE41_RS09730

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,009,967	+				-0.7
2,009,967	+				-0.1
2,009,967	+				-1.2
2,009,967	+				+0.7
2,009,968	-				+0.0
2,009,968	-				-0.7
2,009,968	-				-1.1
2,009,968	-				-2.2
2,009,968	-				+0.5
2,009,968	-				+0.0
2,009,998	-				+1.2
2,010,152	+		ABIE41_RS09725	0.15	+0.6
2,010,153	-		ABIE41_RS09725	0.15	+0.5
2,010,153	-		ABIE41_RS09725	0.15	-0.6
2,010,161	+		ABIE41_RS09725	0.16	-0.4
2,010,161	+		ABIE41_RS09725	0.16	+1.8
2,010,161	+		ABIE41_RS09725	0.16	-0.0
2,010,161	+		ABIE41_RS09725	0.16	+0.9
2,010,162	-		ABIE41_RS09725	0.16	-0.3
2,010,162	-		ABIE41_RS09725	0.16	+0.2
2,010,162	-		ABIE41_RS09725	0.16	-0.7
2,010,162	-		ABIE41_RS09725	0.16	+0.4
2,010,179	+		ABIE41_RS09725	0.18	-0.5
2,010,392	+		ABIE41_RS09725	0.44	+0.0
2,010,393	-		ABIE41_RS09725	0.44	+0.2
2,010,393	-		ABIE41_RS09725	0.44	+0.9
2,010,393	-		ABIE41_RS09725	0.44	-1.2
2,010,393	-		ABIE41_RS09725	0.44	-0.7
2,010,551	+		ABIE41_RS09725	0.64	-0.1
2,010,660	-		ABIE41_RS09725	0.77	-0.9
2,010,715	-		ABIE41_RS09725	0.84	+0.2
2,010,738	+		ABIE41_RS09725	0.86	+0.2
2,010,738	+		ABIE41_RS09725	0.86	+0.3
2,010,738	+		ABIE41_RS09725	0.86	-1.0
2,010,738	+		ABIE41_RS09725	0.86	-1.5
2,010,738	+		ABIE41_RS09725	0.86	+1.1
2,010,739	-		ABIE41_RS09725	0.87	-0.5
2,010,846	+				-1.2
2,010,847	-				-3.8
2,010,847	-				+1.4
2,010,885	+				+0.3
2,010,885	+				-1.5
2,010,886	-				-1.5
2,010,886	-				-0.6
2,010,886	-				+1.2
2,011,143	+		ABIE41_RS09730	0.15	-2.5
2,011,144	-		ABIE41_RS09730	0.15	-0.5
2,011,144	-		ABIE41_RS09730	0.15	+0.4
2,011,164	+		ABIE41_RS09730	0.17	-1.4
2,011,165	-		ABIE41_RS09730	0.17	+0.5
2,011,416	+		ABIE41_RS09730	0.36	+0.4
2,011,416	+		ABIE41_RS09730	0.36	-0.3
2,011,417	-		ABIE41_RS09730	0.36	-1.0
2,011,417	-		ABIE41_RS09730	0.36	+1.6
2,011,518	+		ABIE41_RS09730	0.43	-0.9
2,011,519	-		ABIE41_RS09730	0.43	+0.0
2,011,560	+		ABIE41_RS09730	0.46	+0.1
2,011,560	+		ABIE41_RS09730	0.46	+0.3
2,011,560	+		ABIE41_RS09730	0.46	-0.5
2,011,560	+		ABIE41_RS09730	0.46	-0.7
2,011,560	+		ABIE41_RS09730	0.46	+0.1
2,011,560	+		ABIE41_RS09730	0.46	-0.7
2,011,560	+		ABIE41_RS09730	0.46	+0.1
2,011,560	+		ABIE41_RS09730	0.46	+0.4
2,011,560	+		ABIE41_RS09730	0.46	-1.4
2,011,560	+		ABIE41_RS09730	0.46	-0.1
2,011,560	+		ABIE41_RS09730	0.46	-1.9
2,011,560	+		ABIE41_RS09730	0.46	-0.4
2,011,560	+		ABIE41_RS09730	0.46	+0.6
2,011,561	-		ABIE41_RS09730	0.47	+0.0
2,011,561	-		ABIE41_RS09730	0.47	-1.4
2,011,561	-		ABIE41_RS09730	0.47	+0.8
2,011,561	-		ABIE41_RS09730	0.47	+0.3
2,011,561	-		ABIE41_RS09730	0.47	+0.6
2,011,561	-		ABIE41_RS09730	0.47	-2.0
2,011,561	-		ABIE41_RS09730	0.47	-0.5
2,011,899	+		ABIE41_RS09730	0.72	+1.2
2,011,899	+		ABIE41_RS09730	0.72	-0.6
2,011,900	-		ABIE41_RS09730	0.72	-1.5
2,011,900	-		ABIE41_RS09730	0.72	-0.0
2,011,995	+		ABIE41_RS09730	0.79	+3.2
2,011,995	+		ABIE41_RS09730	0.79	+0.3
2,011,995	+		ABIE41_RS09730	0.79	+0.3
2,011,996	-		ABIE41_RS09730	0.79	+0.2
2,011,996	-		ABIE41_RS09730	0.79	+1.3
2,011,996	-		ABIE41_RS09730	0.79	+0.5
2,011,996	-		ABIE41_RS09730	0.79	-0.6
2,012,046	+		ABIE41_RS09730	0.83	+1.0
2,012,046	+		ABIE41_RS09730	0.83	+1.6
2,012,046	+		ABIE41_RS09730	0.83	-1.0
2,012,046	+		ABIE41_RS09730	0.83	-0.5
2,012,046	+		ABIE41_RS09730	0.83	-0.6
2,012,046	+		ABIE41_RS09730	0.83	+0.3
2,012,046	+		ABIE41_RS09730	0.83	-1.0
2,012,046	+		ABIE41_RS09730	0.83	-0.2
2,012,046	+		ABIE41_RS09730	0.83	+0.3
2,012,046	+		ABIE41_RS09730	0.83	-0.5
2,012,046	+		ABIE41_RS09730	0.83	-1.2
2,012,046	+		ABIE41_RS09730	0.83	-0.1
2,012,046	+		ABIE41_RS09730	0.83	-3.2
2,012,046	+		ABIE41_RS09730	0.83	-1.5
2,012,047	-		ABIE41_RS09730	0.83	-0.1
2,012,047	-		ABIE41_RS09730	0.83	-0.1
2,012,047	-		ABIE41_RS09730	0.83	+0.7
2,012,047	-		ABIE41_RS09730	0.83	+0.7
2,012,047	-		ABIE41_RS09730	0.83	-0.1
2,012,047	-		ABIE41_RS09730	0.83	-0.2
2,012,047	-		ABIE41_RS09730	0.83	+0.6
2,012,076	+		ABIE41_RS09730	0.85	+0.1
2,012,076	+		ABIE41_RS09730	0.85	-0.2
2,012,076	+		ABIE41_RS09730	0.85	-0.0
2,012,076	+		ABIE41_RS09730	0.85	+0.2
2,012,076	+		ABIE41_RS09730	0.85	+0.1
2,012,076	+		ABIE41_RS09730	0.85	-1.1
2,012,077	-		ABIE41_RS09730	0.86	-2.5
2,012,118	+		ABIE41_RS09730	0.89	+0.2
2,012,151	+				-0.2
2,012,151	+				-1.4
2,012,151	+				+1.4
2,012,152	-				+1.4
2,012,152	-				+0.6
2,012,152	-				-0.6
2,012,152	-				-0.3
2,012,384	+				-0.6
2,012,384	+				-2.8
2,012,384	+				-0.4
2,012,384	+				-0.4
2,012,384	+				-0.3
2,012,385	-				+1.1
2,012,505	-		ABIE41_RS09735	0.19	-0.0
2,012,505	-		ABIE41_RS09735	0.19	-0.1
2,012,505	-		ABIE41_RS09735	0.19	-1.7
2,012,505	-		ABIE41_RS09735	0.19	-1.5
2,012,510	+		ABIE41_RS09735	0.20	-0.5
2,012,510	+		ABIE41_RS09735	0.20	-0.6
2,012,510	+		ABIE41_RS09735	0.20	+0.4
2,012,510	+		ABIE41_RS09735	0.20	+0.6
2,012,510	+		ABIE41_RS09735	0.20	-2.3
2,012,511	-		ABIE41_RS09735	0.20	+0.4
2,012,511	-		ABIE41_RS09735	0.20	-1.2
2,012,511	-		ABIE41_RS09735	0.20	-0.5
2,012,576	+		ABIE41_RS09735	0.26	-1.1
2,012,576	+		ABIE41_RS09735	0.26	-0.2
2,012,576	+		ABIE41_RS09735	0.26	+0.2
2,012,576	+		ABIE41_RS09735	0.26	-1.2
2,012,576	+		ABIE41_RS09735	0.26	+2.0
2,012,576	+		ABIE41_RS09735	0.26	-0.1
2,012,577	-		ABIE41_RS09735	0.26	-0.9
2,012,577	-		ABIE41_RS09735	0.26	+0.3
2,012,577	-		ABIE41_RS09735	0.26	-0.4
2,012,577	-		ABIE41_RS09735	0.26	-0.1
2,012,577	-		ABIE41_RS09735	0.26	-0.7
2,012,589	-		ABIE41_RS09735	0.27	-1.8
2,012,708	+		ABIE41_RS09735	0.37	+1.0
2,012,708	+		ABIE41_RS09735	0.37	-0.2
2,012,708	+		ABIE41_RS09735	0.37	-0.2
2,012,708	+		ABIE41_RS09735	0.37	+0.2
2,012,709	-		ABIE41_RS09735	0.38	+1.0
2,012,709	-		ABIE41_RS09735	0.38	+0.2
2,012,709	-		ABIE41_RS09735	0.38	+0.3
2,012,756	+		ABIE41_RS09735	0.42	-1.0
2,012,756	+		ABIE41_RS09735	0.42	-1.2
2,012,756	+		ABIE41_RS09735	0.42	+0.5
2,012,757	-		ABIE41_RS09735	0.42	+0.2
2,012,757	-		ABIE41_RS09735	0.42	+0.6
2,012,757	-		ABIE41_RS09735	0.42	+0.4
2,012,757	-		ABIE41_RS09735	0.42	-0.3
2,012,757	-		ABIE41_RS09735	0.42	-0.4
2,012,790	-		ABIE41_RS09735	0.45	+0.3
2,012,891	+		ABIE41_RS09735	0.54	-2.3
2,012,891	+		ABIE41_RS09735	0.54	-1.5
2,012,891	+		ABIE41_RS09735	0.54	-0.1
2,012,891	+		ABIE41_RS09735	0.54	+0.1
2,012,891	+		ABIE41_RS09735	0.54	+0.6
2,012,891	+		ABIE41_RS09735	0.54	+0.8
2,012,892	-		ABIE41_RS09735	0.54	+1.0
2,012,897	+		ABIE41_RS09735	0.54	-2.3
2,012,897	+		ABIE41_RS09735	0.54	-1.6
2,013,009	-		ABIE41_RS09735	0.64	+0.1
2,013,035	+		ABIE41_RS09735	0.67	+2.4
2,013,035	+		ABIE41_RS09735	0.67	+1.1
2,013,050	+		ABIE41_RS09735	0.68	-0.5
2,013,050	+		ABIE41_RS09735	0.68	-0.1
2,013,050	+		ABIE41_RS09735	0.68	-0.0
2,013,050	+		ABIE41_RS09735	0.68	+0.1
2,013,050	+		ABIE41_RS09735	0.68	-2.3
2,013,051	-		ABIE41_RS09735	0.68	+0.2
2,013,051	-		ABIE41_RS09735	0.68	+0.7
2,013,051	-		ABIE41_RS09735	0.68	-2.3