Strain Fitness in Bosea sp. OAE506 around ABIE41_RS09720

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,008,224	+		ABIE41_RS09715	0.28	-0.4
2,008,224	+		ABIE41_RS09715	0.28	-0.2
2,008,224	+		ABIE41_RS09715	0.28	+0.3
2,008,224	+		ABIE41_RS09715	0.28	+0.0
2,008,224	+		ABIE41_RS09715	0.28	-0.7
2,008,224	+		ABIE41_RS09715	0.28	+0.5
2,008,224	+		ABIE41_RS09715	0.28	-1.0
2,008,225	-		ABIE41_RS09715	0.28	-1.5
2,008,225	-		ABIE41_RS09715	0.28	-1.7
2,008,225	-		ABIE41_RS09715	0.28	+0.2
2,008,225	-		ABIE41_RS09715	0.28	-0.3
2,008,303	-		ABIE41_RS09715	0.35	+0.3
2,008,303	-		ABIE41_RS09715	0.35	-0.3
2,008,341	+		ABIE41_RS09715	0.38	+0.4
2,008,341	+		ABIE41_RS09715	0.38	+0.4
2,008,342	-		ABIE41_RS09715	0.39	+0.5
2,008,342	-		ABIE41_RS09715	0.39	-1.5
2,008,342	-		ABIE41_RS09715	0.39	-1.0
2,008,425	+		ABIE41_RS09715	0.46	-0.1
2,008,425	+		ABIE41_RS09715	0.46	-0.7
2,008,426	-		ABIE41_RS09715	0.46	-0.1
2,008,428	-		ABIE41_RS09715	0.46	-0.9
2,008,445	+		ABIE41_RS09715	0.48	+0.9
2,008,479	+		ABIE41_RS09715	0.51	-1.8
2,008,479	+		ABIE41_RS09715	0.51	+1.2
2,008,480	-		ABIE41_RS09715	0.51	+0.8
2,008,480	-		ABIE41_RS09715	0.51	+0.6
2,008,521	+		ABIE41_RS09715	0.54	+2.1
2,008,521	+		ABIE41_RS09715	0.54	-0.9
2,008,522	-		ABIE41_RS09715	0.54	+0.4
2,008,674	+		ABIE41_RS09715	0.68	+0.2
2,008,674	+		ABIE41_RS09715	0.68	-0.6
2,008,674	+		ABIE41_RS09715	0.68	+1.2
2,008,675	-		ABIE41_RS09715	0.68	+0.6
2,008,675	-		ABIE41_RS09715	0.68	+2.9
2,008,675	-		ABIE41_RS09715	0.68	-1.2
2,008,675	-		ABIE41_RS09715	0.68	+0.4
2,008,755	+		ABIE41_RS09715	0.75	+0.2
2,008,755	+		ABIE41_RS09715	0.75	-0.1
2,008,755	+		ABIE41_RS09715	0.75	+1.0
2,008,756	-		ABIE41_RS09715	0.75	+0.2
2,008,756	-		ABIE41_RS09715	0.75	-0.1
2,008,756	-		ABIE41_RS09715	0.75	+1.9
2,008,756	-		ABIE41_RS09715	0.75	-0.1
2,008,756	-		ABIE41_RS09715	0.75	-0.1
2,008,756	-		ABIE41_RS09715	0.75	-0.7
2,008,757	-		ABIE41_RS09715	0.75	-1.5
2,008,758	+		ABIE41_RS09715	0.75	+1.8
2,008,758	+		ABIE41_RS09715	0.75	-0.3
2,008,759	-		ABIE41_RS09715	0.75	+0.6
2,008,989	+				+1.3
2,008,990	-				+0.2
2,009,014	-				-0.4
2,009,014	-				+2.5
2,009,361	+		ABIE41_RS09720	0.19	+0.8
2,009,361	+		ABIE41_RS09720	0.19	+0.0
2,009,413	+		ABIE41_RS09720	0.25	+1.7
2,009,496	+		ABIE41_RS09720	0.35	+0.4
2,009,496	+		ABIE41_RS09720	0.35	+0.7
2,009,625	+		ABIE41_RS09720	0.51	+0.1
2,009,625	+		ABIE41_RS09720	0.51	-1.5
2,009,625	+		ABIE41_RS09720	0.51	-2.5
2,009,626	-		ABIE41_RS09720	0.51	-1.7
2,009,626	-		ABIE41_RS09720	0.51	+0.2
2,009,626	-		ABIE41_RS09720	0.51	-1.1
2,009,626	-		ABIE41_RS09720	0.51	-2.1
2,009,926	-		ABIE41_RS09720	0.87	-0.3
2,009,934	+		ABIE41_RS09720	0.88	+2.5
2,009,934	+		ABIE41_RS09720	0.88	+0.1
2,009,934	+		ABIE41_RS09720	0.88	-1.0
2,009,935	-		ABIE41_RS09720	0.88	+1.3
2,009,935	-		ABIE41_RS09720	0.88	-2.0
2,009,967	+				-0.7
2,009,967	+				-0.1
2,009,967	+				-1.2
2,009,967	+				+0.7
2,009,968	-				+0.0
2,009,968	-				-0.7
2,009,968	-				-1.1
2,009,968	-				-2.2
2,009,968	-				+0.5
2,009,968	-				+0.0
2,009,998	-				+1.2
2,010,152	+		ABIE41_RS09725	0.15	+0.6
2,010,153	-		ABIE41_RS09725	0.15	+0.5
2,010,153	-		ABIE41_RS09725	0.15	-0.6
2,010,161	+		ABIE41_RS09725	0.16	-0.4
2,010,161	+		ABIE41_RS09725	0.16	+1.8
2,010,161	+		ABIE41_RS09725	0.16	-0.0
2,010,161	+		ABIE41_RS09725	0.16	+0.9
2,010,162	-		ABIE41_RS09725	0.16	-0.3
2,010,162	-		ABIE41_RS09725	0.16	+0.2
2,010,162	-		ABIE41_RS09725	0.16	-0.7
2,010,162	-		ABIE41_RS09725	0.16	+0.4
2,010,179	+		ABIE41_RS09725	0.18	-0.5
2,010,392	+		ABIE41_RS09725	0.44	+0.0
2,010,393	-		ABIE41_RS09725	0.44	+0.2
2,010,393	-		ABIE41_RS09725	0.44	+0.9
2,010,393	-		ABIE41_RS09725	0.44	-1.2
2,010,393	-		ABIE41_RS09725	0.44	-0.7
2,010,551	+		ABIE41_RS09725	0.64	-0.1
2,010,660	-		ABIE41_RS09725	0.77	-0.9
2,010,715	-		ABIE41_RS09725	0.84	+0.2
2,010,738	+		ABIE41_RS09725	0.86	+0.2
2,010,738	+		ABIE41_RS09725	0.86	+0.3
2,010,738	+		ABIE41_RS09725	0.86	-1.0
2,010,738	+		ABIE41_RS09725	0.86	-1.5
2,010,738	+		ABIE41_RS09725	0.86	+1.1
2,010,739	-		ABIE41_RS09725	0.87	-0.5
2,010,846	+				-1.2
2,010,847	-				-3.8
2,010,847	-				+1.4
2,010,885	+				+0.3
2,010,885	+				-1.5
2,010,886	-				-1.5
2,010,886	-				-0.6
2,010,886	-				+1.2