Strain Fitness in Bosea sp. OAE506 around ABIE41_RS21085

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
4,335,381	+		ABIE41_RS21080	0.29	+0.2
4,335,382	-		ABIE41_RS21080	0.29	-0.6
4,335,467	+		ABIE41_RS21080	0.38	-0.0
4,335,467	+		ABIE41_RS21080	0.38	+0.4
4,335,468	-		ABIE41_RS21080	0.38	+0.0
4,335,468	-		ABIE41_RS21080	0.38	+0.9
4,335,468	-		ABIE41_RS21080	0.38	-0.3
4,335,468	-		ABIE41_RS21080	0.38	+0.1
4,335,468	-		ABIE41_RS21080	0.38	+0.5
4,335,468	-		ABIE41_RS21080	0.38	+2.0
4,335,468	-		ABIE41_RS21080	0.38	-0.4
4,335,624	-		ABIE41_RS21080	0.54	+0.3
4,335,763	+		ABIE41_RS21080	0.69	-0.0
4,335,763	+		ABIE41_RS21080	0.69	+0.3
4,335,763	+		ABIE41_RS21080	0.69	+1.6
4,335,763	+		ABIE41_RS21080	0.69	-0.5
4,335,764	-		ABIE41_RS21080	0.69	-0.2
4,335,764	-		ABIE41_RS21080	0.69	+0.9
4,336,049	+				-0.5
4,336,049	+				-1.5
4,336,050	-				+0.6
4,336,050	-				+0.5
4,336,156	+				+0.0
4,336,269	-				-0.7
4,336,300	+		ABIE41_RS21085	0.12	-0.8
4,336,493	+		ABIE41_RS21085	0.36	+1.4
4,336,494	-		ABIE41_RS21085	0.36	+0.1
4,336,500	-		ABIE41_RS21085	0.36	-0.2
4,336,589	+		ABIE41_RS21085	0.48	-0.6
4,336,589	+		ABIE41_RS21085	0.48	-1.1
4,336,590	-		ABIE41_RS21085	0.48	-1.7
4,336,746	-		ABIE41_RS21085	0.67	+0.3
4,336,982	+				-0.3
4,336,982	+				+0.4
4,336,982	+				-0.4
4,336,982	+				+0.3
4,336,982	+				-0.6
4,336,982	+				+0.3
4,336,982	+				-0.6
4,336,982	+				+0.1
4,336,983	-				+0.4
4,336,983	-				+0.0
4,336,983	-				-0.2
4,336,983	-				-0.6
4,336,983	-				+0.4
4,336,983	-				+0.4
4,337,015	-				-0.2
4,337,320	+		ABIE41_RS21090	0.31	-0.0
4,337,321	-		ABIE41_RS21090	0.31	+1.2
4,337,321	-		ABIE41_RS21090	0.31	+1.2
4,337,321	-		ABIE41_RS21090	0.31	+1.0
4,337,321	-		ABIE41_RS21090	0.31	-0.0
4,337,569	+		ABIE41_RS21090	0.56	+0.4
4,337,591	+		ABIE41_RS21090	0.58	+0.2
4,337,761	+		ABIE41_RS21090	0.75	+0.2
4,337,761	+		ABIE41_RS21090	0.75	+0.3
4,337,762	-		ABIE41_RS21090	0.75	-0.6
4,337,762	-		ABIE41_RS21090	0.75	+0.1
4,337,762	-		ABIE41_RS21090	0.75	+0.6
4,337,762	-		ABIE41_RS21090	0.75	+0.6
4,337,762	-		ABIE41_RS21090	0.75	+0.2
4,337,762	-		ABIE41_RS21090	0.75	+0.2
4,337,762	-		ABIE41_RS21090	0.75	-0.0
4,337,996	+				-1.2
4,337,996	+				-0.3
4,337,997	-				+1.1
4,337,998	+				-0.5
4,337,998	+				-0.4
4,337,999	-				-0.2