Strain Fitness in Bosea sp. OAE506 around ABIE41_RS15225

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
3,114,159	+		ABIE41_RS15215	0.59	-0.2
3,114,160	-		ABIE41_RS15215	0.59	+0.4
3,114,160	-		ABIE41_RS15215	0.59	+0.2
3,114,160	-		ABIE41_RS15215	0.59	-0.7
3,114,160	-		ABIE41_RS15215	0.59	-0.3
3,114,289	-		ABIE41_RS15215	0.68	+0.4
3,114,289	-		ABIE41_RS15215	0.68	-0.7
3,114,356	-		ABIE41_RS15215	0.72	+0.1
3,114,417	+		ABIE41_RS15215	0.76	+0.2
3,114,417	+		ABIE41_RS15215	0.76	+0.3
3,114,618	+		ABIE41_RS15215	0.89	+0.1
3,114,619	-		ABIE41_RS15215	0.89	+0.2
3,114,809	-				+0.6
3,114,809	-				+0.2
3,114,869	+				-0.0
3,115,365	-				-0.1
3,115,379	+				-0.0
3,115,379	+				-0.5
3,115,379	+				-0.3
3,115,380	-				+1.0
3,115,380	-				+0.4
3,115,384	-				+0.4
3,115,404	+				-0.2
3,115,404	+				-0.1
3,115,405	-				-0.3
3,115,472	+				-0.7
3,115,472	+				-0.2
3,115,472	+				+1.9
3,115,472	+				+2.2
3,115,472	+				-0.0
3,115,472	+				-1.0
3,115,472	+				+0.6
3,115,473	-				+0.4
3,115,473	-				+0.6
3,115,514	-				-0.4
3,115,514	-				+0.0
3,115,738	+		ABIE41_RS15230	0.27	+0.0
3,115,738	+		ABIE41_RS15230	0.27	+0.3
3,115,739	-		ABIE41_RS15230	0.27	+0.1
3,115,739	-		ABIE41_RS15230	0.27	-0.6
3,115,744	+		ABIE41_RS15230	0.28	+0.3
3,115,744	+		ABIE41_RS15230	0.28	-0.1
3,115,744	+		ABIE41_RS15230	0.28	-1.2
3,115,744	+		ABIE41_RS15230	0.28	+0.2
3,115,745	-		ABIE41_RS15230	0.28	-0.1
3,115,745	-		ABIE41_RS15230	0.28	-0.3
3,115,745	-		ABIE41_RS15230	0.28	-0.3
3,115,745	-		ABIE41_RS15230	0.28	-0.1
3,115,745	-		ABIE41_RS15230	0.28	+0.0
3,116,197	-		ABIE41_RS15230	0.81	-0.3
3,116,197	-		ABIE41_RS15230	0.81	+0.3