Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12950

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
2,647,861	+		ABIE41_RS12945	0.22	-0.2
2,647,862	-		ABIE41_RS12945	0.23	+0.7
2,647,862	-		ABIE41_RS12945	0.23	+0.1
2,647,862	-		ABIE41_RS12945	0.23	-0.0
2,647,862	-		ABIE41_RS12945	0.23	-0.6
2,647,984	+		ABIE41_RS12945	0.38	+1.5
2,647,984	+		ABIE41_RS12945	0.38	-0.9
2,647,986	+		ABIE41_RS12945	0.38	-0.6
2,647,986	+		ABIE41_RS12945	0.38	+1.0
2,647,986	+		ABIE41_RS12945	0.38	+0.1
2,647,986	+		ABIE41_RS12945	0.38	+0.4
2,647,986	+		ABIE41_RS12945	0.38	-0.2
2,647,986	+		ABIE41_RS12945	0.38	+1.9
2,647,987	-		ABIE41_RS12945	0.38	-0.6
2,647,987	-		ABIE41_RS12945	0.38	-0.2
2,647,987	-		ABIE41_RS12945	0.38	+0.5
2,647,987	-		ABIE41_RS12945	0.38	-0.4
2,648,203	+		ABIE41_RS12945	0.66	-0.5
2,648,204	-		ABIE41_RS12945	0.66	-0.4
2,648,287	+		ABIE41_RS12945	0.76	-2.1
2,648,315	-		ABIE41_RS12945	0.80	-0.8
2,648,535	+				+0.5
2,648,535	+				-0.5
2,648,536	-				-0.3
2,648,786	+		ABIE41_RS12950	0.13	-0.9
2,648,789	+		ABIE41_RS12950	0.13	-0.9
2,648,789	+		ABIE41_RS12950	0.13	-0.9
2,648,928	-		ABIE41_RS12950	0.27	+0.1
2,649,116	+		ABIE41_RS12950	0.45	-1.4
2,649,116	+		ABIE41_RS12950	0.45	+0.6
2,649,117	-		ABIE41_RS12950	0.45	-0.1
2,649,117	-		ABIE41_RS12950	0.45	-0.7
2,649,476	+		ABIE41_RS12950	0.80	+0.6
2,649,477	-		ABIE41_RS12950	0.80	-0.5
2,649,533	+		ABIE41_RS12950	0.85	+0.4
2,649,534	-		ABIE41_RS12950	0.86	+0.2
2,649,534	-		ABIE41_RS12950	0.86	-0.0
2,649,534	-		ABIE41_RS12950	0.86	-0.7
2,649,579	-				-1.0
2,649,579	-				-1.0
2,649,579	-				-0.4
2,649,579	-				-0.2
2,649,747	+				-0.3
2,649,747	+				+0.1
2,649,748	-				+0.1
2,650,020	+		ABIE41_RS12955	0.17	-1.4
2,650,020	+		ABIE41_RS12955	0.17	-0.6
2,650,020	+		ABIE41_RS12955	0.17	+0.6
2,650,221	+		ABIE41_RS12955	0.35	-0.0
2,650,222	-		ABIE41_RS12955	0.35	+1.3
2,650,520	+		ABIE41_RS12955	0.63	-1.2
2,650,520	+		ABIE41_RS12955	0.63	-0.6
2,650,521	-		ABIE41_RS12955	0.63	+0.6
2,650,648	-		ABIE41_RS12955	0.74	-0.2