Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12935

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
2,645,661	+				-1.1
2,645,661	+				+0.8
2,645,918	+				+0.4
2,645,919	-				-0.2
2,645,945	+				+0.0
2,645,945	+				+0.1
2,645,946	-				+0.0
2,645,946	-				+0.0
2,646,108	-		ABIE41_RS12935	0.10	-0.1
2,646,108	-		ABIE41_RS12935	0.10	-0.2
2,646,108	-		ABIE41_RS12935	0.10	+1.1
2,646,108	-		ABIE41_RS12935	0.10	+0.0
2,646,315	-		ABIE41_RS12935	0.48	-0.1
2,646,354	-		ABIE41_RS12935	0.56	-0.0
2,646,629	+				-0.4
2,646,630	-				+0.1
2,646,670	+				+0.1
2,646,670	+				+0.2
2,646,723	+				+0.2
2,646,723	+				+0.1
2,646,723	+				-0.0
2,646,724	-				-0.6
2,646,799	+				-0.1
2,646,799	+				-0.4
2,646,799	+				+1.4
2,646,799	+				-0.3
2,646,799	+				-0.1
2,646,800	-				-0.2
2,646,800	-				-1.0
2,646,800	-				-0.6
2,646,800	-				-0.9
2,646,800	-				-0.0
2,646,807	+				+0.0
2,646,926	+		ABIE41_RS12940	0.14	-1.0
2,647,106	+		ABIE41_RS12940	0.34	-1.5