Strain Fitness in Bosea sp. OAE506 around ABIE41_RS05650

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,160,735	+		ABIE41_RS05645	0.65	+0.4
1,160,736	-		ABIE41_RS05645	0.65	-0.3
1,160,736	-		ABIE41_RS05645	0.65	-0.2
1,160,736	-		ABIE41_RS05645	0.65	+0.9
1,160,736	-		ABIE41_RS05645	0.65	-0.2
1,161,467	+				+0.7
1,161,479	+				-0.5
1,161,653	+				-0.4
1,161,653	+				+0.3
1,161,653	+				-0.1
1,161,653	+				+0.5
1,161,653	+				-0.1
1,161,653	+				-0.5
1,162,851	-				-3.3
1,162,851	-				-5.0
1,163,106	+		ABIE41_RS05655	0.30	-4.8
1,163,107	-		ABIE41_RS05655	0.30	-0.6
1,163,330	+		ABIE41_RS05655	0.52	-3.6
1,163,330	+		ABIE41_RS05655	0.52	-4.8
1,163,330	+		ABIE41_RS05655	0.52	-2.5
1,163,330	+		ABIE41_RS05655	0.52	-5.7
1,163,330	+		ABIE41_RS05655	0.52	-1.6
1,163,331	-		ABIE41_RS05655	0.52	-5.7
1,163,331	-		ABIE41_RS05655	0.52	-3.6
1,163,331	-		ABIE41_RS05655	0.52	-2.4
1,163,331	-		ABIE41_RS05655	0.52	-4.3
1,163,421	-		ABIE41_RS05655	0.61	-4.0
1,163,421	-		ABIE41_RS05655	0.61	-1.2
1,163,661	+		ABIE41_RS05655	0.85	-2.2
1,163,661	+		ABIE41_RS05655	0.85	-1.4
1,163,661	+		ABIE41_RS05655	0.85	-4.1
1,163,661	+		ABIE41_RS05655	0.85	-1.4
1,163,661	+		ABIE41_RS05655	0.85	-4.5
1,163,662	-		ABIE41_RS05655	0.85	-6.1
1,163,662	-		ABIE41_RS05655	0.85	-3.9
1,163,727	+				-3.2