Strain Fitness in Bosea sp. OAE506 around ABIE41_RS19490

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
4,011,372	+		ABIE41_RS19480	0.39	+1.9
4,011,373	-		ABIE41_RS19480	0.39	+1.6
4,011,448	-		ABIE41_RS19480	0.51	+2.0
4,011,450	+		ABIE41_RS19480	0.52	+1.7
4,011,450	+		ABIE41_RS19480	0.52	+1.9
4,011,450	+		ABIE41_RS19480	0.52	+1.8
4,011,450	+		ABIE41_RS19480	0.52	+2.0
4,011,450	+		ABIE41_RS19480	0.52	+2.2
4,011,451	-		ABIE41_RS19480	0.52	+1.3
4,011,451	-		ABIE41_RS19480	0.52	+2.0
4,011,451	-		ABIE41_RS19480	0.52	+2.1
4,011,451	-		ABIE41_RS19480	0.52	+2.0
4,011,564	+		ABIE41_RS19480	0.71	+1.9
4,011,564	+		ABIE41_RS19480	0.71	+1.9
4,011,564	+		ABIE41_RS19480	0.71	+1.9
4,011,564	+		ABIE41_RS19480	0.71	+2.9
4,011,565	-		ABIE41_RS19480	0.71	+2.5
4,011,565	-		ABIE41_RS19480	0.71	+2.5
4,012,027	+		ABIE41_RS19485	0.29	-0.2
4,012,183	-		ABIE41_RS19485	0.77	+0.3
4,012,248	+				-0.1
4,012,248	+				-0.2
4,012,248	+				+0.8
4,012,249	-				+0.1
4,012,249	-				+0.9
4,012,375	+				-0.2
4,012,375	+				-0.8
4,012,376	-				-0.5
4,012,376	-				-0.3
4,012,499	-				+0.8
4,012,499	-				+0.2
4,012,723	+		ABIE41_RS19490	0.18	-0.4
4,012,724	-		ABIE41_RS19490	0.19	+0.1
4,012,724	-		ABIE41_RS19490	0.19	+0.0
4,012,873	+		ABIE41_RS19490	0.26	-0.1
4,012,912	+		ABIE41_RS19490	0.28	+0.0
4,012,912	+		ABIE41_RS19490	0.28	+0.9
4,012,913	-		ABIE41_RS19490	0.28	-1.2
4,012,913	-		ABIE41_RS19490	0.28	+0.8
4,012,991	-		ABIE41_RS19490	0.32	+0.2
4,013,147	-		ABIE41_RS19490	0.40	+0.5
4,013,167	+		ABIE41_RS19490	0.41	+0.4
4,013,167	+		ABIE41_RS19490	0.41	+0.9
4,013,167	+		ABIE41_RS19490	0.41	+0.7
4,013,167	+		ABIE41_RS19490	0.41	+0.2
4,013,167	+		ABIE41_RS19490	0.41	+0.8
4,013,332	+		ABIE41_RS19490	0.49	-0.2
4,013,332	+		ABIE41_RS19490	0.49	+0.3
4,013,333	-		ABIE41_RS19490	0.49	+0.2
4,013,333	-		ABIE41_RS19490	0.49	-0.1
4,013,333	-		ABIE41_RS19490	0.49	-0.7
4,014,160	+				+0.1
4,014,160	+				-1.6
4,014,160	+				+0.3
4,014,160	+				+0.0
4,014,160	+				+0.5
4,014,160	+				-0.2
4,014,160	+				+0.4
4,014,160	+				-0.3
4,014,160	+				-0.3
4,014,160	+				+0.4
4,014,160	+				-0.3
4,014,161	-				+0.7
4,014,161	-				-0.5
4,014,161	-				+0.9
4,014,161	-				+1.4
4,014,229	+				+0.1
4,014,229	+				+0.3
4,014,229	+				-0.6
4,014,229	+				+1.0
4,014,230	-				-2.5
4,014,230	-				+0.9
4,014,230	-				-0.3
4,014,230	-				+1.4
4,014,230	-				+0.8
4,014,230	-				+1.1
4,014,230	-				-0.0
4,014,230	-				+0.4
4,014,465	+				+0.3
4,014,465	+				+0.4
4,014,466	-				-1.0
4,014,768	+		ABIE41_RS19495	0.28	+1.3
4,014,768	+		ABIE41_RS19495	0.28	+0.9
4,014,769	-		ABIE41_RS19495	0.29	-0.7
4,014,769	-		ABIE41_RS19495	0.29	+0.3
4,014,769	-		ABIE41_RS19495	0.29	+0.0
4,014,804	+		ABIE41_RS19495	0.31	-0.2
4,014,804	+		ABIE41_RS19495	0.31	-0.2
4,014,804	+		ABIE41_RS19495	0.31	-0.2
4,014,805	-		ABIE41_RS19495	0.31	+0.1
4,014,805	-		ABIE41_RS19495	0.31	+0.4
4,014,805	-		ABIE41_RS19495	0.31	+0.8
4,014,915	+		ABIE41_RS19495	0.38	-0.7
4,014,915	+		ABIE41_RS19495	0.38	+0.3
4,014,915	+		ABIE41_RS19495	0.38	+0.5
4,014,915	+		ABIE41_RS19495	0.38	+0.5
4,014,915	+		ABIE41_RS19495	0.38	-1.0
4,014,915	+		ABIE41_RS19495	0.38	+1.4
4,014,915	+		ABIE41_RS19495	0.38	-0.5
4,014,916	-		ABIE41_RS19495	0.38	+0.7
4,014,916	-		ABIE41_RS19495	0.38	-0.4
4,014,916	-		ABIE41_RS19495	0.38	-0.2