Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18780

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
3,867,324	+		ABIE41_RS18770	0.75	+0.3
3,867,325	-		ABIE41_RS18770	0.75	-0.8
3,867,379	+		ABIE41_RS18770	0.87	-2.2
3,867,379	+		ABIE41_RS18770	0.87	-1.8
3,867,773	+		ABIE41_RS18775	0.41	+1.1
3,868,052	+		ABIE41_RS18775	0.74	+0.7
3,868,053	-		ABIE41_RS18775	0.75	-1.5
3,868,053	-		ABIE41_RS18775	0.75	-0.1
3,868,390	-		ABIE41_RS18780	0.24	-0.1
3,868,390	-		ABIE41_RS18780	0.24	+0.0
3,868,390	-		ABIE41_RS18780	0.24	+0.3
3,868,390	-		ABIE41_RS18780	0.24	-0.2
3,868,551	-		ABIE41_RS18780	0.58	-0.1
3,868,584	-		ABIE41_RS18780	0.65	+0.1
3,868,672	+		ABIE41_RS18780	0.83	-0.4
3,868,673	+		ABIE41_RS18780	0.83	-1.4
3,868,673	+		ABIE41_RS18780	0.83	-0.5
3,868,673	+		ABIE41_RS18780	0.83	-0.8
3,868,673	+		ABIE41_RS18780	0.83	+0.4
3,868,673	+		ABIE41_RS18780	0.83	-0.4
3,868,674	-		ABIE41_RS18780	0.83	+0.4
3,868,674	-		ABIE41_RS18780	0.83	-0.8
3,868,674	-		ABIE41_RS18780	0.83	+0.7
3,868,674	-		ABIE41_RS18780	0.83	-1.4
3,868,674	-		ABIE41_RS18780	0.83	-0.0
3,868,692	+		ABIE41_RS18780	0.87	-0.1
3,868,692	+		ABIE41_RS18780	0.87	-0.0
3,868,693	-		ABIE41_RS18780	0.87	+0.2
3,868,880	+				+1.2
3,868,881	-				+0.1
3,868,881	-				-0.2
3,868,952	-		ABIE41_RS18785	0.10	-0.2
3,869,105	+		ABIE41_RS18785	0.19	-0.0
3,869,105	+		ABIE41_RS18785	0.19	-0.4
3,869,105	+		ABIE41_RS18785	0.19	+2.2
3,869,105	+		ABIE41_RS18785	0.19	-2.2
3,869,105	+		ABIE41_RS18785	0.19	-0.9
3,869,105	+		ABIE41_RS18785	0.19	+0.4
3,869,105	+		ABIE41_RS18785	0.19	-1.0
3,869,105	+		ABIE41_RS18785	0.19	+0.7
3,869,105	+		ABIE41_RS18785	0.19	-0.3
3,869,105	+		ABIE41_RS18785	0.19	+1.4
3,869,105	+		ABIE41_RS18785	0.19	+1.3
3,869,105	+		ABIE41_RS18785	0.19	+0.3
3,869,106	-		ABIE41_RS18785	0.19	+0.3
3,869,186	+		ABIE41_RS18785	0.24	+0.5
3,869,187	-		ABIE41_RS18785	0.24	-0.8
3,869,258	+		ABIE41_RS18785	0.28	+0.1
3,869,259	-		ABIE41_RS18785	0.28	-1.0
3,869,280	-		ABIE41_RS18785	0.29	-0.2
3,869,280	-		ABIE41_RS18785	0.29	-0.1
3,869,564	-		ABIE41_RS18785	0.45	+0.2
3,869,660	+		ABIE41_RS18785	0.50	-0.7
3,869,660	+		ABIE41_RS18785	0.50	-0.0
3,869,661	-		ABIE41_RS18785	0.50	+0.9
3,869,690	+		ABIE41_RS18785	0.52	-0.5
3,869,690	+		ABIE41_RS18785	0.52	-0.3
3,869,690	+		ABIE41_RS18785	0.52	-1.2
3,869,691	-		ABIE41_RS18785	0.52	-1.9
3,869,691	-		ABIE41_RS18785	0.52	+0.6
3,869,691	-		ABIE41_RS18785	0.52	+0.4
3,869,691	-		ABIE41_RS18785	0.52	-0.2
3,869,691	-		ABIE41_RS18785	0.52	-1.3
3,869,691	-		ABIE41_RS18785	0.52	+0.6
3,869,691	-		ABIE41_RS18785	0.52	-0.1
3,869,691	-		ABIE41_RS18785	0.52	-0.2
3,869,691	-		ABIE41_RS18785	0.52	-1.8
3,869,691	-		ABIE41_RS18785	0.52	-0.8