Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12505

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
2,561,131	+		ABIE41_RS12500	0.21	-0.1
2,561,131	+		ABIE41_RS12500	0.21	+0.5
2,561,132	-		ABIE41_RS12500	0.21	+1.2
2,561,150	-		ABIE41_RS12500	0.24	+1.2
2,561,152	-		ABIE41_RS12500	0.24	+0.1
2,561,287	+		ABIE41_RS12500	0.41	+0.3
2,561,287	+		ABIE41_RS12500	0.41	-0.4
2,561,287	+		ABIE41_RS12500	0.41	-0.0
2,561,287	+		ABIE41_RS12500	0.41	-0.0
2,561,288	-		ABIE41_RS12500	0.41	+0.3
2,561,288	-		ABIE41_RS12500	0.41	+0.5
2,561,293	+		ABIE41_RS12500	0.42	+1.3
2,561,293	+		ABIE41_RS12500	0.42	+0.8
2,561,294	-		ABIE41_RS12500	0.42	+0.5
2,561,651	+		ABIE41_RS12500	0.87	-0.4
2,561,651	+		ABIE41_RS12500	0.87	-1.2
2,561,651	+		ABIE41_RS12500	0.87	-1.4
2,561,652	-		ABIE41_RS12500	0.88	+0.3
2,561,860	+				-0.2
2,561,860	+				-0.3
2,561,860	+				+0.3
2,561,861	-		ABIE41_RS12505	0.10	-0.4
2,561,861	-		ABIE41_RS12505	0.10	-0.8
2,561,861	-		ABIE41_RS12505	0.10	-0.5
2,561,861	-		ABIE41_RS12505	0.10	+0.2
2,561,988	+		ABIE41_RS12505	0.23	-1.3
2,561,989	-		ABIE41_RS12505	0.24	+0.3
2,562,523	+		ABIE41_RS12505	0.80	-0.1
2,562,523	+		ABIE41_RS12505	0.80	-1.8
2,562,523	+		ABIE41_RS12505	0.80	+1.2
2,562,523	+		ABIE41_RS12505	0.80	-0.3
2,562,524	-		ABIE41_RS12505	0.80	-0.2
2,562,524	-		ABIE41_RS12505	0.80	+1.0
2,562,524	-		ABIE41_RS12505	0.80	+0.1
2,562,583	+		ABIE41_RS12505	0.86	-0.0
2,562,583	+		ABIE41_RS12505	0.86	+0.6
2,562,762	+				-2.2
2,562,762	+				+2.0
2,562,866	+				+0.4
2,563,347	+		ABIE41_RS12510	0.43	+0.4
2,563,347	+		ABIE41_RS12510	0.43	-0.1
2,563,348	-		ABIE41_RS12510	0.44	-0.4
2,563,348	-		ABIE41_RS12510	0.44	-0.2
2,563,382	+		ABIE41_RS12510	0.46	+0.2