Strain Fitness in Bosea sp. OAE506 around ABIE41_RS11005

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
2,258,926	+				-1.7
2,258,947	+				-0.3
2,259,083	+				+0.0
2,259,083	+				+1.6
2,259,083	+				-2.0
2,259,083	+				+0.0
2,259,084	-				+1.1
2,259,084	-				+0.2
2,259,084	-				+1.0
2,259,144	+				-0.3
2,259,145	-				-0.4
2,259,848	+				-0.1
2,259,848	+				-1.5
2,259,849	-				+0.5
2,259,849	-				+0.5
2,259,849	-				-1.4
2,259,849	-				+0.0
2,259,850	-				+0.0
2,259,857	-				+0.6
2,259,857	-				-0.2
2,259,886	+				-1.8
2,260,243	+		ABIE41_RS11005	0.39	+0.0
2,260,243	+		ABIE41_RS11005	0.39	-0.8
2,260,243	+		ABIE41_RS11005	0.39	-1.4
2,260,243	+		ABIE41_RS11005	0.39	-0.5
2,260,244	-		ABIE41_RS11005	0.39	-1.0
2,260,244	-		ABIE41_RS11005	0.39	-1.6
2,260,387	+		ABIE41_RS11005	0.56	-0.4
2,260,388	-		ABIE41_RS11005	0.56	-1.7
2,260,953	+		ABIE41_RS11010	0.33	-0.3
2,260,953	+		ABIE41_RS11010	0.33	-2.1
2,260,954	-		ABIE41_RS11010	0.33	-0.2
2,260,974	+		ABIE41_RS11010	0.36	-0.7
2,260,974	+		ABIE41_RS11010	0.36	+0.2
2,260,974	+		ABIE41_RS11010	0.36	+2.3
2,260,975	-		ABIE41_RS11010	0.37	+0.0
2,260,975	-		ABIE41_RS11010	0.37	+0.7
2,260,975	-		ABIE41_RS11010	0.37	-0.5
2,261,055	+		ABIE41_RS11010	0.51	+0.3
2,261,109	+		ABIE41_RS11010	0.60	-0.1
2,261,385	+				+0.9
2,261,698	+		ABIE41_RS11015	0.16	-1.1