Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07970

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
1,635,949	+		ABIE41_RS07965	0.21	-0.2
1,635,949	+		ABIE41_RS07965	0.21	-2.6
1,635,949	+		ABIE41_RS07965	0.21	-0.5
1,635,949	+		ABIE41_RS07965	0.21	-0.5
1,635,949	+		ABIE41_RS07965	0.21	-1.9
1,635,950	-		ABIE41_RS07965	0.21	-0.2
1,635,950	-		ABIE41_RS07965	0.21	+0.2
1,635,950	-		ABIE41_RS07965	0.21	+0.3
1,635,950	-		ABIE41_RS07965	0.21	+1.1
1,635,950	-		ABIE41_RS07965	0.21	+0.3
1,635,950	-		ABIE41_RS07965	0.21	+0.3
1,635,950	-		ABIE41_RS07965	0.21	-0.7
1,635,950	-		ABIE41_RS07965	0.21	-0.0
1,635,950	-		ABIE41_RS07965	0.21	+0.2
1,635,950	-		ABIE41_RS07965	0.21	+0.8
1,635,950	-		ABIE41_RS07965	0.21	-1.0
1,636,108	+		ABIE41_RS07965	0.35	+1.2
1,636,108	+		ABIE41_RS07965	0.35	-0.3
1,636,109	-		ABIE41_RS07965	0.35	+0.6
1,636,196	+		ABIE41_RS07965	0.42	-0.1
1,636,196	+		ABIE41_RS07965	0.42	-0.5
1,636,196	+		ABIE41_RS07965	0.42	-0.2
1,636,197	-		ABIE41_RS07965	0.42	-1.2
1,636,197	-		ABIE41_RS07965	0.42	+1.8
1,636,197	-		ABIE41_RS07965	0.42	-2.9
1,636,197	-		ABIE41_RS07965	0.42	-0.2
1,636,197	-		ABIE41_RS07965	0.42	-0.3
1,636,198	+		ABIE41_RS07965	0.42	-0.0
1,636,198	+		ABIE41_RS07965	0.42	+0.8
1,636,198	+		ABIE41_RS07965	0.42	-0.2
1,636,198	+		ABIE41_RS07965	0.42	+0.2
1,636,198	+		ABIE41_RS07965	0.42	-0.1
1,636,198	+		ABIE41_RS07965	0.42	-0.6
1,636,199	-		ABIE41_RS07965	0.42	-1.0
1,636,199	-		ABIE41_RS07965	0.42	-0.2
1,636,199	-		ABIE41_RS07965	0.42	-0.7
1,636,199	-		ABIE41_RS07965	0.42	-0.2
1,636,240	+		ABIE41_RS07965	0.46	+0.5
1,636,240	+		ABIE41_RS07965	0.46	+1.0
1,636,240	+		ABIE41_RS07965	0.46	-0.0
1,636,240	+		ABIE41_RS07965	0.46	-0.5
1,636,240	+		ABIE41_RS07965	0.46	-0.0
1,636,241	-		ABIE41_RS07965	0.46	-0.5
1,636,807	-				-0.8
1,636,858	+				-0.5
1,636,858	+				-0.5
1,636,858	+				-1.9
1,636,958	+				+0.2
1,636,958	+				+0.2
1,636,958	+				-0.9
1,636,958	+				-1.4
1,636,958	+				+0.3
1,636,959	-				-0.7
1,636,959	-				+0.0
1,636,959	-				+1.8
1,636,959	-				-0.0
1,637,213	+		ABIE41_RS07970	0.24	+0.8
1,637,214	-		ABIE41_RS07970	0.24	+0.0
1,637,498	+		ABIE41_RS07970	0.49	-0.4
1,637,498	+		ABIE41_RS07970	0.49	+0.7
1,637,499	-		ABIE41_RS07970	0.49	+0.1
1,637,562	-		ABIE41_RS07970	0.54	+0.9
1,637,643	-		ABIE41_RS07970	0.61	-0.2
1,637,643	-		ABIE41_RS07970	0.61	+0.6
1,637,708	+		ABIE41_RS07970	0.66	+0.2
1,637,708	+		ABIE41_RS07970	0.66	+0.8
1,637,708	+		ABIE41_RS07970	0.66	-1.1
1,637,708	+		ABIE41_RS07970	0.66	+1.0
1,637,708	+		ABIE41_RS07970	0.66	+0.4
1,637,709	-		ABIE41_RS07970	0.67	+1.2
1,637,709	-		ABIE41_RS07970	0.67	-0.1
1,637,709	-		ABIE41_RS07970	0.67	-0.8
1,637,709	-		ABIE41_RS07970	0.67	+1.6
1,637,709	-		ABIE41_RS07970	0.67	-0.2
1,638,069	+				-0.2
1,638,070	-				-0.2
1,638,070	-				+1.0
1,638,517	+		ABIE41_RS07975	0.31	-0.7
1,638,517	+		ABIE41_RS07975	0.31	+0.0
1,638,517	+		ABIE41_RS07975	0.31	-1.0
1,638,517	+		ABIE41_RS07975	0.31	-1.4
1,638,517	+		ABIE41_RS07975	0.31	+1.2
1,638,517	+		ABIE41_RS07975	0.31	-0.4
1,638,517	+		ABIE41_RS07975	0.31	+0.4
1,638,517	+		ABIE41_RS07975	0.31	+1.1
1,638,517	+		ABIE41_RS07975	0.31	+0.9
1,638,518	-		ABIE41_RS07975	0.31	-0.0
1,638,518	-		ABIE41_RS07975	0.31	-0.2
1,638,518	-		ABIE41_RS07975	0.31	+0.4
1,638,518	-		ABIE41_RS07975	0.31	-0.4
1,638,518	-		ABIE41_RS07975	0.31	+2.4
1,638,518	-		ABIE41_RS07975	0.31	-0.1
1,638,832	+		ABIE41_RS07975	0.66	-0.2
1,638,832	+		ABIE41_RS07975	0.66	-0.2
1,638,833	-		ABIE41_RS07975	0.66	+0.0
1,638,833	-		ABIE41_RS07975	0.66	+2.2
1,638,833	-		ABIE41_RS07975	0.66	-0.5
1,638,833	-		ABIE41_RS07975	0.66	+0.5
1,638,922	+		ABIE41_RS07975	0.76	-0.4
1,638,922	+		ABIE41_RS07975	0.76	-1.0
1,638,922	+		ABIE41_RS07975	0.76	-1.7
1,638,922	+		ABIE41_RS07975	0.76	-0.3
1,638,922	+		ABIE41_RS07975	0.76	+0.7
1,638,923	-		ABIE41_RS07975	0.76	-0.7
1,638,923	-		ABIE41_RS07975	0.76	+0.2
1,638,923	-		ABIE41_RS07975	0.76	+0.8
1,638,923	-		ABIE41_RS07975	0.76	+0.4
1,638,923	-		ABIE41_RS07975	0.76	+0.1