Strain Fitness in Bosea sp. OAE506 around ABIE41_RS21065

Experiment: Ying_AminoAcid20 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 1
4,331,368	+				-1.6
4,331,368	+				-0.5
4,331,368	+				-0.8
4,331,369	-				+0.5
4,331,646	-		ABIE41_RS21060	0.27	+1.1
4,331,735	+		ABIE41_RS21060	0.37	+0.7
4,331,736	-		ABIE41_RS21060	0.37	+0.0
4,331,790	-		ABIE41_RS21060	0.44	-0.4
4,331,937	-		ABIE41_RS21060	0.60	-0.3
4,331,937	-		ABIE41_RS21060	0.60	-0.5
4,331,937	-		ABIE41_RS21060	0.60	+0.0
4,331,937	-		ABIE41_RS21060	0.60	+0.6
4,332,101	+		ABIE41_RS21060	0.79	-0.1
4,332,482	-		ABIE41_RS21065	0.12	-0.3
4,332,482	-		ABIE41_RS21065	0.12	-1.0
4,332,620	+		ABIE41_RS21065	0.21	+0.9
4,332,621	-		ABIE41_RS21065	0.21	-2.0
4,332,621	-		ABIE41_RS21065	0.21	-1.3
4,332,621	-		ABIE41_RS21065	0.21	-1.4
4,332,624	-		ABIE41_RS21065	0.21	+0.8
4,332,624	-		ABIE41_RS21065	0.21	-1.0
4,332,624	-		ABIE41_RS21065	0.21	+1.2
4,333,051	-		ABIE41_RS21065	0.49	+0.4
4,333,562	-		ABIE41_RS21065	0.82	-1.2
4,333,710	+				+1.4
4,333,711	-				+1.1
4,333,711	-				+0.8
4,333,768	+				+0.4
4,333,768	+				+0.1
4,333,769	-				-1.6
4,333,769	-				+0.8
4,333,769	-				-1.0
4,333,898	+				+1.7
4,333,898	+				-0.8
4,333,898	+				-1.0
4,333,899	-				+0.5
4,334,017	-		ABIE41_RS21070	0.27	-0.8
4,334,017	-		ABIE41_RS21070	0.27	-1.5
4,334,069	-		ABIE41_RS21070	0.36	-0.4
4,334,103	+		ABIE41_RS21070	0.41	-1.8
4,334,104	-		ABIE41_RS21070	0.41	+0.6
4,334,592	+		ABIE41_RS21075	0.19	+1.0
4,334,593	-		ABIE41_RS21075	0.19	-0.8
4,334,685	+		ABIE41_RS21075	0.33	-0.6
4,334,685	+		ABIE41_RS21075	0.33	-0.1
4,334,686	-		ABIE41_RS21075	0.33	-0.1
4,334,687	-		ABIE41_RS21075	0.33	-1.5
4,334,735	+		ABIE41_RS21075	0.41	+0.2
4,334,761	+		ABIE41_RS21075	0.45	+0.6
4,334,761	+		ABIE41_RS21075	0.45	+0.0
4,334,761	+		ABIE41_RS21075	0.45	-1.3
4,334,761	+		ABIE41_RS21075	0.45	+0.2
4,334,761	+		ABIE41_RS21075	0.45	+0.6
4,334,761	+		ABIE41_RS21075	0.45	+0.6
4,334,762	-		ABIE41_RS21075	0.45	+0.3
4,334,762	-		ABIE41_RS21075	0.45	+0.2
4,334,762	-		ABIE41_RS21075	0.45	-1.5
4,334,762	-		ABIE41_RS21075	0.45	+1.2
4,334,762	-		ABIE41_RS21075	0.45	-0.2
4,334,765	+		ABIE41_RS21075	0.46	-1.8
4,334,765	+		ABIE41_RS21075	0.46	-0.6
4,334,765	+		ABIE41_RS21075	0.46	-1.0
4,334,765	+		ABIE41_RS21075	0.46	-3.5
4,334,765	+		ABIE41_RS21075	0.46	-1.3
4,334,765	+		ABIE41_RS21075	0.46	+0.0
4,334,766	-		ABIE41_RS21075	0.46	+0.2
4,334,766	-		ABIE41_RS21075	0.46	-0.4
4,334,766	-		ABIE41_RS21075	0.46	-0.1
4,334,766	-		ABIE41_RS21075	0.46	+0.0
4,334,766	-		ABIE41_RS21075	0.46	-0.6
4,334,766	-		ABIE41_RS21075	0.46	-0.5
4,334,766	-		ABIE41_RS21075	0.46	+0.2
4,334,766	-		ABIE41_RS21075	0.46	-1.0
4,334,766	-		ABIE41_RS21075	0.46	+0.3