Strain Fitness in Bosea sp. OAE506 around ABIE41_RS19790

Experiment: Ying_AminoAcid20 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 1
4,061,320	+		ABIE41_RS19785	0.44	+0.2
4,061,321	-		ABIE41_RS19785	0.44	-0.2
4,061,419	+		ABIE41_RS19785	0.52	+2.1
4,061,785	+		ABIE41_RS19785	0.83	+0.9
4,061,786	-		ABIE41_RS19785	0.83	+0.2
4,061,786	-		ABIE41_RS19785	0.83	-0.1
4,061,786	-		ABIE41_RS19785	0.83	+0.5
4,061,797	+		ABIE41_RS19785	0.84	-2.3
4,061,797	+		ABIE41_RS19785	0.84	-1.1
4,062,040	+				-0.1
4,062,040	+				-0.0
4,062,040	+				-1.1
4,062,111	+				-0.1
4,062,112	-				-0.8
4,062,186	+				+0.2
4,062,186	+				+0.2
4,062,186	+				-0.3
4,062,197	-				+0.6
4,062,262	+		ABIE41_RS19790	0.19	-0.5
4,062,263	-		ABIE41_RS19790	0.19	-3.6
4,062,298	+		ABIE41_RS19790	0.28	+0.3
4,062,299	-		ABIE41_RS19790	0.28	-0.2
4,062,501	+		ABIE41_RS19790	0.81	-1.6
4,062,546	-				-0.1
4,062,984	+				+0.7
4,063,048	+				-0.2
4,063,048	+				-1.7
4,063,048	+				+0.1
4,063,088	-				+0.8
4,063,088	-				+0.1
4,063,144	+				+1.5
4,063,145	-				-1.3
4,063,145	-				-0.3
4,063,145	-				-0.5
4,063,270	+		ABIE41_RS19795	0.37	-0.3
4,063,270	+		ABIE41_RS19795	0.37	-0.1
4,063,271	-		ABIE41_RS19795	0.37	-1.3
4,063,271	-		ABIE41_RS19795	0.37	-1.6
4,063,271	-		ABIE41_RS19795	0.37	+0.0
4,063,364	+		ABIE41_RS19795	0.61	-0.4
4,063,456	+		ABIE41_RS19795	0.85	+1.2
4,063,456	+		ABIE41_RS19795	0.85	+0.1
4,063,517	-				-0.4