Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18760

Experiment: Ying_AminoAcid20 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 1
3,862,748	+				+0.8
3,862,861	+		ABIE41_RS18755	0.16	-1.4
3,862,861	+		ABIE41_RS18755	0.16	+0.8
3,862,862	-		ABIE41_RS18755	0.16	+0.2
3,862,941	+		ABIE41_RS18755	0.25	+3.6
3,862,942	-		ABIE41_RS18755	0.25	+2.7
3,863,203	+		ABIE41_RS18755	0.55	-3.1
3,863,203	+		ABIE41_RS18755	0.55	-0.1
3,863,203	+		ABIE41_RS18755	0.55	-0.6
3,863,203	+		ABIE41_RS18755	0.55	-1.2
3,863,203	+		ABIE41_RS18755	0.55	-1.8
3,863,203	+		ABIE41_RS18755	0.55	-3.1
3,863,204	-		ABIE41_RS18755	0.55	+4.2
3,863,204	-		ABIE41_RS18755	0.55	+0.8
3,863,204	-		ABIE41_RS18755	0.55	-0.2
3,863,204	-		ABIE41_RS18755	0.55	+0.5
3,863,204	-		ABIE41_RS18755	0.55	-0.5
3,863,204	-		ABIE41_RS18755	0.55	-0.2
3,863,204	-		ABIE41_RS18755	0.55	+0.3
3,863,204	-		ABIE41_RS18755	0.55	+0.1
3,863,204	-		ABIE41_RS18755	0.55	+1.4
3,863,204	-		ABIE41_RS18755	0.55	-1.0
3,863,211	-		ABIE41_RS18755	0.56	+0.3
3,863,467	+		ABIE41_RS18755	0.85	-1.2
3,863,467	+		ABIE41_RS18755	0.85	-0.2
3,863,696	+				+0.1
3,863,697	-				+0.0
3,863,775	+				-0.3
3,863,775	+				+1.3
3,863,775	+				+0.1
3,863,776	-				-1.6
3,863,776	-				-1.9
3,863,921	+		ABIE41_RS18760	0.10	+1.1
3,863,921	+		ABIE41_RS18760	0.10	-0.3
3,863,922	-		ABIE41_RS18760	0.10	+1.0
3,863,922	-		ABIE41_RS18760	0.10	-0.4
3,863,922	-		ABIE41_RS18760	0.10	-2.0
3,863,922	-		ABIE41_RS18760	0.10	-2.7
3,863,922	-		ABIE41_RS18760	0.10	+0.0
3,863,922	-		ABIE41_RS18760	0.10	+0.4
3,864,095	+		ABIE41_RS18760	0.16	-0.4
3,864,095	+		ABIE41_RS18760	0.16	+0.1
3,864,095	+		ABIE41_RS18760	0.16	-3.5
3,864,095	+		ABIE41_RS18760	0.16	-1.0
3,864,095	+		ABIE41_RS18760	0.16	-2.3
3,864,095	+		ABIE41_RS18760	0.16	-0.1
3,864,095	+		ABIE41_RS18760	0.16	+0.4
3,864,095	+		ABIE41_RS18760	0.16	+0.9
3,864,096	-		ABIE41_RS18760	0.16	+1.9
3,864,096	-		ABIE41_RS18760	0.16	-1.5
3,864,096	-		ABIE41_RS18760	0.16	+0.8
3,864,096	-		ABIE41_RS18760	0.16	+0.0
3,864,096	-		ABIE41_RS18760	0.16	+0.6
3,864,096	-		ABIE41_RS18760	0.16	+0.1
3,864,096	-		ABIE41_RS18760	0.16	+0.7
3,864,096	-		ABIE41_RS18760	0.16	-0.0
3,864,096	-		ABIE41_RS18760	0.16	+0.2
3,864,096	-		ABIE41_RS18760	0.16	+0.9
3,864,096	-		ABIE41_RS18760	0.16	+3.6
3,864,197	+		ABIE41_RS18760	0.20	+3.2
3,864,197	+		ABIE41_RS18760	0.20	-0.7
3,864,198	-		ABIE41_RS18760	0.20	+0.7
3,864,871	+		ABIE41_RS18760	0.43	-0.5
3,865,859	+		ABIE41_RS18760	0.77	-0.1
3,865,860	-		ABIE41_RS18760	0.77	-1.1
3,865,860	-		ABIE41_RS18760	0.77	-2.0
3,865,860	-		ABIE41_RS18760	0.77	+2.7
3,865,860	-		ABIE41_RS18760	0.77	-0.7
3,866,087	+		ABIE41_RS18760	0.85	+0.7
3,866,087	+		ABIE41_RS18760	0.85	-0.1
3,866,087	+		ABIE41_RS18760	0.85	-0.5
3,866,088	-		ABIE41_RS18760	0.85	+0.3
3,866,088	-		ABIE41_RS18760	0.85	-0.3
3,866,308	-				-0.0
3,866,381	-				+0.2
3,866,381	-				+0.6
3,866,381	-				-0.4
3,866,381	-				-0.5
3,866,556	+				-0.0
3,866,556	+				-0.1
3,866,680	-		ABIE41_RS18765	0.31	+0.4
3,866,757	+		ABIE41_RS18765	0.49	-4.1
3,866,776	-		ABIE41_RS18765	0.53	-0.2
3,866,776	-		ABIE41_RS18765	0.53	-0.2
3,866,776	-		ABIE41_RS18765	0.53	-0.9
3,866,811	+		ABIE41_RS18765	0.61	-0.7
3,866,811	+		ABIE41_RS18765	0.61	+0.0
3,866,812	-		ABIE41_RS18765	0.61	+0.2
3,866,812	-		ABIE41_RS18765	0.61	+0.7
3,866,812	-		ABIE41_RS18765	0.61	+0.4
3,866,812	-		ABIE41_RS18765	0.61	-2.9
3,866,812	-		ABIE41_RS18765	0.61	+0.7
3,866,812	-		ABIE41_RS18765	0.61	-0.9
3,866,812	-		ABIE41_RS18765	0.61	-0.0
3,866,812	-		ABIE41_RS18765	0.61	-1.2
3,867,217	+		ABIE41_RS18770	0.51	+0.7
3,867,218	-		ABIE41_RS18770	0.51	+0.4
3,867,218	-		ABIE41_RS18770	0.51	+0.1
3,867,218	-		ABIE41_RS18770	0.51	+0.0
3,867,324	+		ABIE41_RS18770	0.75	-0.8
3,867,325	-		ABIE41_RS18770	0.75	-1.4
3,867,379	+		ABIE41_RS18770	0.87	-0.2
3,867,379	+		ABIE41_RS18770	0.87	+0.2