Strain Fitness in Bosea sp. OAE506 around ABIE41_RS15090

Experiment: Ying_AminoAcid20 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 1
3,079,790	+				-0.0
3,079,790	+				+0.7
3,079,790	+				-1.2
3,079,791	-				+0.1
3,079,791	-				-0.2
3,079,956	+				+0.2
3,080,283	+				+0.2
3,080,283	+				+0.1
3,080,283	+				-0.1
3,080,284	-				-2.6
3,080,284	-				-2.7
3,080,284	-				+1.2
3,080,284	-				-2.0
3,080,354	+				+0.2
3,080,355	-				-0.3
3,080,435	+				-0.2
3,080,436	-				-0.1
3,080,436	-				+0.4
3,080,436	-				+0.0
3,080,476	+				+0.9
3,080,476	+				-1.2
3,080,477	-				-0.4
3,080,495	+				-0.4
3,080,495	+				-0.7
3,080,495	+				+1.6
3,080,496	-				-0.1
3,080,542	-				-0.2
3,080,542	-				+1.6
3,080,565	-				-0.9
3,080,696	-				-0.0
3,080,696	-				-0.4
3,080,706	-				-0.3
3,080,729	-		ABIE41_RS15090	0.11	+0.9
3,080,842	-		ABIE41_RS15090	0.21	-0.2
3,080,925	-		ABIE41_RS15090	0.28	-0.7
3,081,013	-		ABIE41_RS15090	0.36	-0.0
3,081,085	-		ABIE41_RS15090	0.43	-0.8
3,081,085	-		ABIE41_RS15090	0.43	-1.6
3,081,318	-		ABIE41_RS15090	0.64	+0.3
3,081,318	-		ABIE41_RS15090	0.64	+0.2
3,081,548	-		ABIE41_RS15090	0.85	-1.1
3,081,548	-		ABIE41_RS15090	0.85	+0.1
3,081,551	-		ABIE41_RS15090	0.85	-0.4
3,081,551	-		ABIE41_RS15090	0.85	-0.8
3,081,757	-				-0.2
3,082,177	-				+0.8
3,082,232	+				+1.0
3,082,232	+				+1.5
3,082,232	+				+0.4
3,082,232	+				+0.5
3,082,233	-				+0.5
3,082,311	+				-0.0
3,082,311	+				-0.1
3,082,311	+				+0.1
3,082,311	+				-0.0
3,082,642	+		ABIE41_RS15100	0.11	-0.6
3,082,643	-		ABIE41_RS15100	0.11	-1.0
3,082,643	-		ABIE41_RS15100	0.11	-0.2
3,082,643	-		ABIE41_RS15100	0.11	-0.5
3,082,643	-		ABIE41_RS15100	0.11	+0.1