Strain Fitness in Bosea sp. OAE506 around ABIE41_RS14165

Experiment: Ying_AminoAcid20 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 1
2,901,030	+		ABIE41_RS14160	0.29	+0.1
2,901,584	+		ABIE41_RS14160	0.85	+0.9
2,901,585	-		ABIE41_RS14160	0.86	+0.0
2,901,591	-		ABIE41_RS14160	0.86	+1.2
2,901,640	-				-1.3
2,901,770	+				-0.1
2,902,076	-		ABIE41_RS14165	0.49	-1.9
2,902,122	+		ABIE41_RS14165	0.59	+0.2
2,902,122	+		ABIE41_RS14165	0.59	-2.2
2,902,122	+		ABIE41_RS14165	0.59	-0.4
2,902,123	-		ABIE41_RS14165	0.59	-2.5
2,902,197	+		ABIE41_RS14165	0.76	-0.0
2,902,777	+				+0.4
2,902,778	-				-0.6
2,902,778	-				+0.6
2,902,780	+				-0.7
2,902,780	+				-2.3
2,902,781	-				+1.2
2,902,781	-				-0.1
2,902,781	-				-0.4
2,902,781	-				-0.3
2,902,781	-				+0.3
2,902,781	-				+0.1
2,902,854	-		ABIE41_RS14175	0.11	+0.0
2,902,859	-		ABIE41_RS14175	0.11	-0.2
2,902,879	+		ABIE41_RS14175	0.13	-2.9
2,902,930	+		ABIE41_RS14175	0.16	+0.1
2,902,931	-		ABIE41_RS14175	0.16	+1.0
2,902,931	-		ABIE41_RS14175	0.16	+1.1
2,902,931	-		ABIE41_RS14175	0.16	+0.1
2,902,945	+		ABIE41_RS14175	0.17	+0.1
2,902,945	+		ABIE41_RS14175	0.17	+1.6
2,902,945	+		ABIE41_RS14175	0.17	-0.1
2,902,946	-		ABIE41_RS14175	0.17	-0.4
2,902,946	-		ABIE41_RS14175	0.17	-0.2
2,902,946	-		ABIE41_RS14175	0.17	+0.0
2,902,946	-		ABIE41_RS14175	0.17	+2.0
2,902,946	-		ABIE41_RS14175	0.17	+0.7
2,903,168	-		ABIE41_RS14175	0.30	+0.1
2,903,168	-		ABIE41_RS14175	0.30	+0.5