Strain Fitness in Bosea sp. OAE506 around ABIE41_RS14150

Experiment: Ying_AminoAcid20 rep C; time point 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS14145 and ABIE41_RS14150 are separated by 7 nucleotidesABIE41_RS14150 and ABIE41_RS14155 are separated by 83 nucleotides ABIE41_RS14145: ABIE41_RS14145 - DUF2336 domain-containing protein, at 2,898,097 to 2,899,311 _RS14145 ABIE41_RS14150: ABIE41_RS14150 - carboxymuconolactone decarboxylase family protein, at 2,899,319 to 2,899,735 _RS14150 ABIE41_RS14155: ABIE41_RS14155 - NAD kinase, at 2,899,819 to 2,900,592 _RS14155 Position (kb) 2899 2900Strain fitness (log2 ratio) -2 -1 0 1at 2898.333 kb on - strand, within ABIE41_RS14145at 2899.244 kb on - strandat 2899.643 kb on + strand, within ABIE41_RS14150at 2899.823 kb on + strandat 2900.638 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ying_AminoAcid20 rep C; time point 1
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2,898,333 - ABIE41_RS14145 0.19 -1.0
2,899,244 - +0.0
2,899,643 + ABIE41_RS14150 0.78 -0.9
2,899,823 + +0.1
2,900,638 - -2.1

Or see this region's nucleotide sequence