Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12265

Experiment: Ying_AminoAcid20 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 1
2,509,255	-		ABIE41_RS12260	0.14	+0.1
2,509,264	-		ABIE41_RS12260	0.16	-1.2
2,509,266	+		ABIE41_RS12260	0.16	+0.0
2,509,266	+		ABIE41_RS12260	0.16	+0.0
2,509,267	-		ABIE41_RS12260	0.16	-0.8
2,509,695	+		ABIE41_RS12260	0.73	-2.0
2,509,696	-		ABIE41_RS12260	0.73	-1.1
2,509,696	-		ABIE41_RS12260	0.73	-1.5
2,509,881	+				+0.4
2,509,941	+				+0.1
2,509,942	-				+0.2
2,509,973	+				+0.5
2,509,973	+				+0.0
2,509,973	+				-1.9
2,509,973	+				+0.3
2,509,973	+				+0.3
2,509,974	-				-0.6
2,509,974	-				-0.1
2,509,974	-				-0.0
2,509,974	-				-1.1
2,509,976	-				-0.2
2,509,976	-				-0.3
2,509,976	-				+0.1
2,510,270	+				+0.1
2,510,271	-				+0.5
2,510,465	+		ABIE41_RS12265	0.22	-0.5
2,510,465	+		ABIE41_RS12265	0.22	+0.7
2,510,465	+		ABIE41_RS12265	0.22	-1.5
2,510,465	+		ABIE41_RS12265	0.22	+0.3
2,510,465	+		ABIE41_RS12265	0.22	-1.5
2,510,465	+		ABIE41_RS12265	0.22	-0.8
2,510,466	-		ABIE41_RS12265	0.22	-2.7
2,511,198	+		ABIE41_RS12265	0.72	-0.0
2,511,198	+		ABIE41_RS12265	0.72	+0.7
2,511,199	-		ABIE41_RS12265	0.72	-0.3
2,511,300	-		ABIE41_RS12265	0.79	-0.7
2,511,356	+		ABIE41_RS12265	0.83	+1.9
2,511,489	+				+0.3
2,511,490	-				+0.2
2,511,490	-				+0.2
2,511,597	+				-2.2
2,511,597	+				+0.5
2,511,598	-				-1.1
2,511,643	+				-0.3
2,511,643	+				+0.3
2,511,644	-				-0.5
2,511,644	-				-0.4
2,511,644	-				+0.5
2,511,644	-				-0.6
2,511,674	+				+0.5
2,511,756	+		ABIE41_RS12270	0.19	-0.5
2,511,756	+		ABIE41_RS12270	0.19	+0.4
2,511,757	-		ABIE41_RS12270	0.19	+0.3
2,511,757	-		ABIE41_RS12270	0.19	-0.1
2,511,757	-		ABIE41_RS12270	0.19	-0.8
2,512,074	+		ABIE41_RS12270	0.87	+0.7
2,512,075	-		ABIE41_RS12270	0.87	-0.4
2,512,075	-		ABIE41_RS12270	0.87	+1.0
2,512,075	-		ABIE41_RS12270	0.87	+0.5
2,512,315	-				+0.6
2,512,315	-				-0.3