Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18800

Experiment: Ying_all64 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 1
3,871,623	-				-0.1
3,871,666	+				+0.4
3,871,666	+				+0.0
3,871,666	+				+0.9
3,871,666	+				-0.3
3,871,666	+				-3.4
3,871,667	-				-0.3
3,871,667	-				+0.1
3,871,667	-				-0.6
3,871,667	-				+0.4
3,871,699	+		ABIE41_RS18795	0.12	+0.5
3,871,850	-		ABIE41_RS18795	0.29	+2.5
3,871,861	+		ABIE41_RS18795	0.30	-0.0
3,871,861	+		ABIE41_RS18795	0.30	+1.9
3,871,861	+		ABIE41_RS18795	0.30	+1.5
3,871,862	-		ABIE41_RS18795	0.30	-0.4
3,871,918	+		ABIE41_RS18795	0.37	-0.4
3,871,919	-		ABIE41_RS18795	0.37	+0.9
3,871,919	-		ABIE41_RS18795	0.37	+0.5
3,871,919	-		ABIE41_RS18795	0.37	+1.3
3,872,173	+		ABIE41_RS18795	0.65	+0.2
3,872,173	+		ABIE41_RS18795	0.65	+0.1
3,872,173	+		ABIE41_RS18795	0.65	-1.9
3,872,173	+		ABIE41_RS18795	0.65	-1.0
3,872,174	-		ABIE41_RS18795	0.66	+0.2
3,872,174	-		ABIE41_RS18795	0.66	+0.2
3,872,174	-		ABIE41_RS18795	0.66	-0.5
3,872,174	-		ABIE41_RS18795	0.66	-0.5
3,872,174	-		ABIE41_RS18795	0.66	-0.1
3,872,174	-		ABIE41_RS18795	0.66	-0.7
3,872,174	-		ABIE41_RS18795	0.66	+0.6
3,872,174	-		ABIE41_RS18795	0.66	+0.0
3,872,607	-		ABIE41_RS18800	0.12	+0.9
3,872,607	-		ABIE41_RS18800	0.12	+0.7
3,873,324	+		ABIE41_RS18800	0.76	-0.3
3,873,325	-		ABIE41_RS18800	0.76	+1.3
3,873,325	-		ABIE41_RS18800	0.76	-0.4
3,873,325	-		ABIE41_RS18800	0.76	+2.6
3,873,325	-		ABIE41_RS18800	0.76	-0.4
3,873,325	-		ABIE41_RS18800	0.76	+0.1
3,873,352	+		ABIE41_RS18800	0.79	+0.0
3,873,521	+				+0.1
3,873,521	+				+1.8
3,873,521	+				+0.2
3,873,522	-				-0.7
3,873,559	+				+0.7
3,873,560	-				-0.0
3,873,560	-				+0.6
3,873,613	+				+0.0
3,873,613	+				-0.5
3,873,614	-				-0.3
3,873,713	+		ABIE41_RS18805	0.15	-0.2
3,873,755	+		ABIE41_RS18805	0.19	+0.1
3,873,755	+		ABIE41_RS18805	0.19	+1.8
3,873,755	+		ABIE41_RS18805	0.19	+0.7
3,873,755	+		ABIE41_RS18805	0.19	+0.2
3,873,755	+		ABIE41_RS18805	0.19	-0.5
3,873,756	-		ABIE41_RS18805	0.19	-0.2
3,873,756	-		ABIE41_RS18805	0.19	-0.2
3,873,855	-		ABIE41_RS18805	0.31	+0.9
3,873,962	+		ABIE41_RS18805	0.43	+2.9
3,874,035	-		ABIE41_RS18805	0.51	-0.7
3,874,364	+		ABIE41_RS18805	0.88	-0.9
3,874,364	+		ABIE41_RS18805	0.88	-2.1
3,874,365	-		ABIE41_RS18805	0.88	-0.2
3,874,448	+				-0.2
3,874,448	+				-0.6
3,874,450	-				+0.3
3,874,479	+				-0.9
3,874,479	+				-0.4
3,874,479	+				-0.0
3,874,479	+				-1.2
3,874,479	+				-0.3
3,874,479	+				+0.0
3,874,480	-				+0.4
3,874,480	-				+3.7
3,874,480	-				+0.4
3,874,480	-				+0.3
3,874,480	-				-0.0
3,874,480	-				-0.1
3,874,480	-				+1.6
3,874,480	-				-0.8
3,874,585	+		ABIE41_RS18810	0.12	+0.6
3,874,585	+		ABIE41_RS18810	0.12	+0.3
3,874,586	-		ABIE41_RS18810	0.12	+0.5
3,874,586	-		ABIE41_RS18810	0.12	+0.4
3,874,586	-		ABIE41_RS18810	0.12	-0.1