Strain Fitness in Bosea sp. OAE506 around ABIE41_RS15585

Experiment: Ying_all64 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 1
3,191,364	+		ABIE41_RS15575	0.71	+0.1
3,191,365	-		ABIE41_RS15575	0.71	-1.3
3,191,367	+		ABIE41_RS15575	0.71	+0.5
3,191,368	-		ABIE41_RS15575	0.71	-0.1
3,191,541	+		ABIE41_RS15575	0.83	+0.9
3,191,645	+				-1.7
3,191,685	+				+0.1
3,191,686	-				+0.0
3,191,686	-				-0.2
3,191,810	+				+1.1
3,192,112	+		ABIE41_RS15580	0.51	-1.8
3,192,195	-		ABIE41_RS15580	0.72	+1.1
3,192,195	-		ABIE41_RS15580	0.72	+0.7
3,192,195	-		ABIE41_RS15580	0.72	-0.3
3,192,255	-		ABIE41_RS15580	0.87	+0.1
3,192,433	-		ABIE41_RS15585	0.29	+1.1
3,192,433	-		ABIE41_RS15585	0.29	+1.0
3,192,564	+		ABIE41_RS15585	0.61	+1.0
3,192,564	+		ABIE41_RS15585	0.61	-2.9
3,192,564	+		ABIE41_RS15585	0.61	-0.6
3,192,564	+		ABIE41_RS15585	0.61	+0.7
3,192,750	+				-1.0
3,192,751	-				-1.8
3,192,751	-				+0.5
3,192,751	-				-0.1
3,192,915	+		ABIE41_RS15590	0.11	+0.2
3,192,934	+		ABIE41_RS15590	0.13	-0.2
3,193,003	+		ABIE41_RS15590	0.19	-1.1
3,193,003	+		ABIE41_RS15590	0.19	+0.2
3,193,004	-		ABIE41_RS15590	0.19	-0.3
3,193,097	+		ABIE41_RS15590	0.28	+0.3
3,193,097	+		ABIE41_RS15590	0.28	+1.4
3,193,098	-		ABIE41_RS15590	0.28	-0.2
3,193,098	-		ABIE41_RS15590	0.28	+1.0
3,193,098	-		ABIE41_RS15590	0.28	+1.0
3,193,320	+		ABIE41_RS15590	0.49	+1.8
3,193,320	+		ABIE41_RS15590	0.49	-0.1
3,193,320	+		ABIE41_RS15590	0.49	+1.4
3,193,320	+		ABIE41_RS15590	0.49	+0.9
3,193,321	-		ABIE41_RS15590	0.49	+0.8
3,193,321	-		ABIE41_RS15590	0.49	+0.1
3,193,321	-		ABIE41_RS15590	0.49	+0.7
3,193,321	-		ABIE41_RS15590	0.49	+0.1
3,193,321	-		ABIE41_RS15590	0.49	+0.2
3,193,361	-		ABIE41_RS15590	0.52	+0.0
3,193,361	-		ABIE41_RS15590	0.52	+0.1
3,193,362	+		ABIE41_RS15590	0.52	-0.2
3,193,362	+		ABIE41_RS15590	0.52	-0.5
3,193,362	+		ABIE41_RS15590	0.52	+1.2
3,193,362	+		ABIE41_RS15590	0.52	-0.5
3,193,363	-		ABIE41_RS15590	0.53	-0.7
3,193,363	-		ABIE41_RS15590	0.53	-0.6
3,193,363	-		ABIE41_RS15590	0.53	-0.4
3,193,363	-		ABIE41_RS15590	0.53	-1.1
3,193,363	-		ABIE41_RS15590	0.53	-0.6
3,193,647	+		ABIE41_RS15590	0.79	-0.7
3,193,647	+		ABIE41_RS15590	0.79	-0.5
3,193,648	-		ABIE41_RS15590	0.79	-0.1