Strain Fitness in Bosea sp. OAE506 around ABIE41_RS11270

Experiment: Ying_all64 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 1
2,315,886	-		ABIE41_RS11265	0.37	+0.7
2,315,886	-		ABIE41_RS11265	0.37	-0.0
2,315,887	+		ABIE41_RS11265	0.37	+0.7
2,315,908	-		ABIE41_RS11265	0.39	+0.4
2,316,095	+		ABIE41_RS11265	0.54	-0.1
2,316,095	+		ABIE41_RS11265	0.54	+1.5
2,316,096	-		ABIE41_RS11265	0.54	-0.1
2,316,096	-		ABIE41_RS11265	0.54	+0.1
2,316,096	-		ABIE41_RS11265	0.54	-0.1
2,316,113	+		ABIE41_RS11265	0.56	+1.2
2,316,113	+		ABIE41_RS11265	0.56	-0.0
2,316,114	-		ABIE41_RS11265	0.56	+1.0
2,316,114	-		ABIE41_RS11265	0.56	+0.1
2,316,114	-		ABIE41_RS11265	0.56	-0.1
2,316,246	-		ABIE41_RS11265	0.66	-0.1
2,316,246	-		ABIE41_RS11265	0.66	+0.1
2,316,246	-		ABIE41_RS11265	0.66	+0.5
2,316,407	+		ABIE41_RS11265	0.80	-0.1
2,316,536	+				+0.7
2,316,537	-				-0.5
2,317,135	+		ABIE41_RS11270	0.19	+0.6
2,317,135	+		ABIE41_RS11270	0.19	+0.8
2,317,136	-		ABIE41_RS11270	0.19	+0.5
2,317,136	-		ABIE41_RS11270	0.19	-1.5
2,317,187	+		ABIE41_RS11270	0.22	+0.4
2,317,187	+		ABIE41_RS11270	0.22	-0.0
2,317,188	-		ABIE41_RS11270	0.22	-1.6
2,317,188	-		ABIE41_RS11270	0.22	-0.2
2,317,283	+		ABIE41_RS11270	0.28	+0.4
2,317,284	-		ABIE41_RS11270	0.28	+0.2
2,317,284	-		ABIE41_RS11270	0.28	+0.2
2,317,292	+		ABIE41_RS11270	0.28	-2.3
2,317,292	+		ABIE41_RS11270	0.28	-1.5
2,317,293	-		ABIE41_RS11270	0.28	+0.6
2,317,296	-		ABIE41_RS11270	0.29	+0.2
2,317,376	+		ABIE41_RS11270	0.34	+0.3
2,317,376	+		ABIE41_RS11270	0.34	-1.4
2,317,377	-		ABIE41_RS11270	0.34	-0.6
2,317,481	+		ABIE41_RS11270	0.40	-2.6
2,317,481	+		ABIE41_RS11270	0.40	-0.6
2,317,482	-		ABIE41_RS11270	0.40	-0.4
2,317,482	-		ABIE41_RS11270	0.40	+0.7
2,317,668	+		ABIE41_RS11270	0.52	-0.7
2,317,669	-		ABIE41_RS11270	0.52	+0.2
2,317,669	-		ABIE41_RS11270	0.52	-0.1
2,317,703	-		ABIE41_RS11270	0.54	+0.5
2,317,771	+		ABIE41_RS11270	0.58	-0.2
2,317,771	+		ABIE41_RS11270	0.58	+1.0
2,317,771	+		ABIE41_RS11270	0.58	+0.5
2,317,771	+		ABIE41_RS11270	0.58	-0.1
2,317,827	-		ABIE41_RS11270	0.62	-1.2
2,317,827	-		ABIE41_RS11270	0.62	-3.0
2,317,827	-		ABIE41_RS11270	0.62	+1.2
2,317,942	+		ABIE41_RS11270	0.69	-1.5
2,317,943	-		ABIE41_RS11270	0.69	-0.0
2,317,943	-		ABIE41_RS11270	0.69	-0.3
2,317,963	+		ABIE41_RS11270	0.70	+2.1
2,317,963	+		ABIE41_RS11270	0.70	-0.1
2,317,963	+		ABIE41_RS11270	0.70	-1.2
2,317,963	+		ABIE41_RS11270	0.70	+0.3
2,317,963	+		ABIE41_RS11270	0.70	-0.2
2,317,964	-		ABIE41_RS11270	0.70	+1.8
2,317,964	-		ABIE41_RS11270	0.70	-0.3
2,317,964	-		ABIE41_RS11270	0.70	-0.7
2,318,012	+		ABIE41_RS11270	0.73	-0.9
2,318,013	-		ABIE41_RS11270	0.73	+1.7
2,318,013	-		ABIE41_RS11270	0.73	-0.5
2,318,339	+				-1.0
2,318,339	+				-0.2
2,318,339	+				+0.1
2,318,487	+				-3.4
2,318,569	+				+0.1
2,318,570	-				-0.0
2,318,608	+		ABIE41_RS11275	0.10	-0.7
2,318,609	-		ABIE41_RS11275	0.10	+0.5
2,318,609	-		ABIE41_RS11275	0.10	-0.5
2,318,609	-		ABIE41_RS11275	0.10	-0.6
2,318,609	-		ABIE41_RS11275	0.10	+0.9
2,318,609	-		ABIE41_RS11275	0.10	-0.5
2,318,609	-		ABIE41_RS11275	0.10	-0.5
2,318,671	+		ABIE41_RS11275	0.16	-0.7
2,318,671	+		ABIE41_RS11275	0.16	+0.5
2,318,671	+		ABIE41_RS11275	0.16	-0.1
2,318,672	-		ABIE41_RS11275	0.16	+1.1
2,318,672	-		ABIE41_RS11275	0.16	+0.1
2,318,672	-		ABIE41_RS11275	0.16	+0.5
2,318,672	-		ABIE41_RS11275	0.16	+0.0
2,318,761	+		ABIE41_RS11275	0.24	+0.4
2,318,761	+		ABIE41_RS11275	0.24	-0.2
2,318,762	-		ABIE41_RS11275	0.24	-0.3
2,318,818	+		ABIE41_RS11275	0.29	-1.6
2,318,818	+		ABIE41_RS11275	0.29	-1.6
2,318,819	-		ABIE41_RS11275	0.29	-0.0
2,318,819	-		ABIE41_RS11275	0.29	+0.4
2,318,896	+		ABIE41_RS11275	0.36	+0.4
2,318,896	+		ABIE41_RS11275	0.36	+0.5
2,318,896	+		ABIE41_RS11275	0.36	-0.4
2,318,897	-		ABIE41_RS11275	0.37	-0.5
2,318,899	+		ABIE41_RS11275	0.37	+1.0
2,318,899	+		ABIE41_RS11275	0.37	-0.1
2,318,900	-		ABIE41_RS11275	0.37	-1.5
2,318,902	+		ABIE41_RS11275	0.37	+0.8
2,318,902	+		ABIE41_RS11275	0.37	+0.6
2,318,902	+		ABIE41_RS11275	0.37	+0.1
2,318,902	+		ABIE41_RS11275	0.37	-0.7
2,318,902	+		ABIE41_RS11275	0.37	-0.3
2,318,903	-		ABIE41_RS11275	0.37	-0.1
2,318,995	+		ABIE41_RS11275	0.45	+0.2
2,318,996	-		ABIE41_RS11275	0.46	-1.2
2,319,163	+		ABIE41_RS11275	0.61	-0.9
2,319,164	-		ABIE41_RS11275	0.61	-0.1
2,319,164	-		ABIE41_RS11275	0.61	+0.1
2,319,164	-		ABIE41_RS11275	0.61	+0.4
2,319,181	+		ABIE41_RS11275	0.62	-0.1
2,319,181	+		ABIE41_RS11275	0.62	-0.5
2,319,298	+		ABIE41_RS11275	0.73	-0.4
2,319,298	+		ABIE41_RS11275	0.73	-0.6
2,319,299	-		ABIE41_RS11275	0.73	-0.0
2,319,304	+		ABIE41_RS11275	0.74	+0.7
2,319,304	+		ABIE41_RS11275	0.74	+0.1