Strain Fitness in Bosea sp. OAE506 around ABIE41_RS20550

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
4,225,114	+		ABIE41_RS20545	0.72	-0.1
4,225,114	+		ABIE41_RS20545	0.72	-0.6
4,225,114	+		ABIE41_RS20545	0.72	-1.2
4,225,115	-		ABIE41_RS20545	0.73	-0.6
4,225,115	-		ABIE41_RS20545	0.73	+2.0
4,225,115	-		ABIE41_RS20545	0.73	-0.8
4,225,115	-		ABIE41_RS20545	0.73	+0.9
4,225,115	-		ABIE41_RS20545	0.73	-0.4
4,226,098	+		ABIE41_RS20550	0.66	-0.7
4,226,098	+		ABIE41_RS20550	0.66	-1.8
4,226,099	-		ABIE41_RS20550	0.66	+0.2
4,226,099	-		ABIE41_RS20550	0.66	-0.7
4,226,527	+				-0.1
4,226,527	+				+0.5
4,226,528	-				-0.0
4,226,539	+				+0.1
4,226,540	-				+0.2
4,226,540	-				-0.2
4,226,549	-				-0.0
4,226,969	-		ABIE41_RS20555	0.68	-0.1
4,226,969	-		ABIE41_RS20555	0.68	+0.2
4,227,008	-		ABIE41_RS20555	0.74	-0.5
4,227,008	-		ABIE41_RS20555	0.74	+0.1
4,227,019	+		ABIE41_RS20555	0.76	-0.8
4,227,019	+		ABIE41_RS20555	0.76	-1.8
4,227,020	-		ABIE41_RS20555	0.76	-0.6
4,227,020	-		ABIE41_RS20555	0.76	+0.0
4,227,020	-		ABIE41_RS20555	0.76	-0.0
4,227,046	+		ABIE41_RS20555	0.80	-0.2
4,227,046	+		ABIE41_RS20555	0.80	+0.4
4,227,046	+		ABIE41_RS20555	0.80	-0.3
4,227,047	-		ABIE41_RS20555	0.80	-0.4
4,227,104	+		ABIE41_RS20555	0.88	-0.3
4,227,355	+		ABIE41_RS20560	0.21	-0.6
4,227,355	+		ABIE41_RS20560	0.21	-0.8
4,227,355	+		ABIE41_RS20560	0.21	+0.2
4,227,356	-		ABIE41_RS20560	0.21	-1.8