Strain Fitness in Bosea sp. OAE506 around ABIE41_RS09705

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
2,005,358	+		ABIE41_RS09700	0.61	+0.5
2,005,358	+		ABIE41_RS09700	0.61	+0.8
2,005,358	+		ABIE41_RS09700	0.61	-0.2
2,005,358	+		ABIE41_RS09700	0.61	+0.4
2,005,358	+		ABIE41_RS09700	0.61	-0.9
2,005,359	-		ABIE41_RS09700	0.61	-2.3
2,005,359	-		ABIE41_RS09700	0.61	-1.7
2,005,616	-		ABIE41_RS09700	0.80	-0.9
2,005,616	-		ABIE41_RS09700	0.80	-0.1
2,005,655	+		ABIE41_RS09700	0.83	+0.4
2,005,781	+				+0.3
2,005,781	+				-0.8
2,005,781	+				+1.1
2,005,781	+				-0.9
2,005,781	+				-1.9
2,005,782	-				+1.4
2,005,782	-				-0.3
2,005,782	-				-0.4
2,005,782	-				+0.2
2,005,782	-				+0.1
2,005,782	-				-1.5
2,005,782	-				-0.9
2,005,782	-				-0.4
2,005,782	-				+0.4
2,005,782	-				-1.5
2,005,782	-				-2.6
2,005,941	+				+0.2
2,005,941	+				+0.4
2,005,959	+				+0.3
2,005,959	+				+0.9
2,005,959	+				+0.6
2,005,960	-				+0.7
2,006,027	+				-0.9
2,006,028	-				-1.1
2,006,083	+				-0.2
2,006,084	-				-0.4
2,006,091	+				-0.4
2,006,091	+				-1.2
2,006,091	+				+0.3
2,006,091	+				+0.7
2,006,091	+				-0.4
2,006,092	-				-1.5
2,006,092	-				+0.2
2,006,092	-				+0.0
2,006,131	+				+1.5
2,006,132	-				-0.4
2,006,396	+		ABIE41_RS09705	0.50	-1.4
2,006,396	+		ABIE41_RS09705	0.50	-0.0
2,006,397	-		ABIE41_RS09705	0.51	+1.7
2,006,397	-		ABIE41_RS09705	0.51	+0.1
2,006,398	+		ABIE41_RS09705	0.51	-0.2
2,006,476	+		ABIE41_RS09705	0.66	-0.2
2,006,477	-		ABIE41_RS09705	0.66	-0.4
2,006,657	+				-2.4
2,006,657	+				-0.5
2,006,657	+				-0.2
2,006,658	-				+0.4
2,006,689	+				+0.8
2,007,053	+		ABIE41_RS09710	0.25	+0.1
2,007,053	+		ABIE41_RS09710	0.25	+1.2
2,007,054	-		ABIE41_RS09710	0.25	-0.1
2,007,054	-		ABIE41_RS09710	0.25	-0.3
2,007,070	+		ABIE41_RS09710	0.27	-0.1
2,007,071	-		ABIE41_RS09710	0.27	-0.9
2,007,071	-		ABIE41_RS09710	0.27	+0.5
2,007,071	-		ABIE41_RS09710	0.27	+0.4
2,007,071	-		ABIE41_RS09710	0.27	-0.1
2,007,180	-		ABIE41_RS09710	0.37	+1.1
2,007,467	+		ABIE41_RS09710	0.63	+0.5
2,007,467	+		ABIE41_RS09710	0.63	-1.3
2,007,467	+		ABIE41_RS09710	0.63	-0.1
2,007,467	+		ABIE41_RS09710	0.63	+0.9
2,007,467	+		ABIE41_RS09710	0.63	-2.6
2,007,467	+		ABIE41_RS09710	0.63	-1.0
2,007,468	-		ABIE41_RS09710	0.63	+0.3
2,007,468	-		ABIE41_RS09710	0.63	-0.1
2,007,468	-		ABIE41_RS09710	0.63	-1.7
2,007,468	-		ABIE41_RS09710	0.63	-0.6
2,007,468	-		ABIE41_RS09710	0.63	+0.0
2,007,468	-		ABIE41_RS09710	0.63	+0.9
2,007,468	-		ABIE41_RS09710	0.63	+0.9
2,007,636	-		ABIE41_RS09710	0.78	-0.3