Strain Fitness in Bosea sp. OAE506 around ABIE41_RS23670

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
4,878,176	+		ABIE41_RS23665	0.47	-2.6
4,878,179	+		ABIE41_RS23665	0.47	-0.0
4,878,179	+		ABIE41_RS23665	0.47	-0.2
4,878,180	-		ABIE41_RS23665	0.47	-0.1
4,878,225	+		ABIE41_RS23665	0.50	+0.0
4,878,226	-		ABIE41_RS23665	0.50	-1.1
4,878,254	+		ABIE41_RS23665	0.52	+0.4
4,878,254	+		ABIE41_RS23665	0.52	+1.4
4,878,254	+		ABIE41_RS23665	0.52	+0.4
4,878,254	+		ABIE41_RS23665	0.52	-0.5
4,878,255	-		ABIE41_RS23665	0.52	+0.6
4,878,255	-		ABIE41_RS23665	0.52	+0.5
4,878,255	-		ABIE41_RS23665	0.52	-0.0
4,878,347	+		ABIE41_RS23665	0.59	+2.8
4,878,347	+		ABIE41_RS23665	0.59	+0.2
4,878,347	+		ABIE41_RS23665	0.59	-0.6
4,878,348	-		ABIE41_RS23665	0.59	-0.1
4,878,348	-		ABIE41_RS23665	0.59	-0.1
4,878,698	+		ABIE41_RS23665	0.84	+1.9
4,878,698	+		ABIE41_RS23665	0.84	+0.3
4,878,699	-		ABIE41_RS23665	0.84	-0.4
4,878,699	-		ABIE41_RS23665	0.84	+1.9
4,878,982	+				-0.0
4,879,061	-		ABIE41_RS23670	0.22	+0.6
4,879,120	+		ABIE41_RS23670	0.32	+0.8
4,879,120	+		ABIE41_RS23670	0.32	+0.9
4,879,120	+		ABIE41_RS23670	0.32	+0.2
4,879,120	+		ABIE41_RS23670	0.32	+0.7
4,879,121	-		ABIE41_RS23670	0.32	-0.7
4,879,121	-		ABIE41_RS23670	0.32	+0.2
4,879,127	-		ABIE41_RS23670	0.33	-0.3
4,879,127	-		ABIE41_RS23670	0.33	+1.0
4,879,213	+		ABIE41_RS23670	0.48	+0.8
4,879,213	+		ABIE41_RS23670	0.48	-0.5
4,879,213	+		ABIE41_RS23670	0.48	+0.8
4,879,213	+		ABIE41_RS23670	0.48	-0.1
4,879,213	+		ABIE41_RS23670	0.48	-0.4
4,879,214	-		ABIE41_RS23670	0.48	+1.1
4,879,342	+		ABIE41_RS23670	0.70	-0.1
4,879,343	-		ABIE41_RS23670	0.70	-0.9
4,879,513	+				+0.2
4,879,514	+				-0.7
4,879,514	+				-0.3
4,879,514	+				+1.7
4,879,515	-				-0.3
4,879,515	-				-1.4
4,879,515	-				+0.1
4,879,673	+				-0.2
4,879,673	+				-0.4
4,879,673	+				+0.3
4,879,673	+				+0.0
4,879,673	+				-0.1
4,879,674	-				-0.2
4,879,674	-				-0.1
4,879,674	-				+1.1
4,879,674	-				-0.3
4,879,674	-				-0.1
4,879,674	-				-0.2
4,879,674	-				-0.2
4,879,674	-				-0.4
4,879,989	-		ABIE41_RS23675	0.33	+0.2
4,880,060	+		ABIE41_RS23675	0.41	+0.9
4,880,060	+		ABIE41_RS23675	0.41	+0.1
4,880,061	-		ABIE41_RS23675	0.41	+1.0
4,880,061	-		ABIE41_RS23675	0.41	+0.7
4,880,120	+		ABIE41_RS23675	0.47	-0.1
4,880,121	-		ABIE41_RS23675	0.47	+0.1
4,880,214	-		ABIE41_RS23675	0.57	+1.2
4,880,214	-		ABIE41_RS23675	0.57	-0.0
4,880,214	-		ABIE41_RS23675	0.57	-0.1
4,880,252	+		ABIE41_RS23675	0.61	-0.2
4,880,253	-		ABIE41_RS23675	0.61	+1.0
4,880,253	-		ABIE41_RS23675	0.61	-0.1
4,880,290	-		ABIE41_RS23675	0.65	-0.1
4,880,291	+		ABIE41_RS23675	0.65	+0.1
4,880,291	+		ABIE41_RS23675	0.65	+0.9
4,880,291	+		ABIE41_RS23675	0.65	-0.5
4,880,291	+		ABIE41_RS23675	0.65	+0.4
4,880,330	+		ABIE41_RS23675	0.69	-0.9
4,880,333	+		ABIE41_RS23675	0.70	-0.2
4,880,333	+		ABIE41_RS23675	0.70	-0.9
4,880,334	-		ABIE41_RS23675	0.70	+2.8