Strain Fitness in Escherichia coli ECRC101 around MCAODC_07815

Experiment: WM_TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP9
1,586,813	-	kefB	MCAODC_07805	0.64	-0.1
1,586,813	-	kefB	MCAODC_07805	0.64	+1.8
1,586,878	+	kefB	MCAODC_07805	0.67	-0.7
1,586,878	+	kefB	MCAODC_07805	0.67	+2.2
1,586,878	+	kefB	MCAODC_07805	0.67	-0.2
1,586,947	+	kefB	MCAODC_07805	0.71	-0.4
1,586,948	-	kefB	MCAODC_07805	0.71	-1.8
1,586,948	-	kefB	MCAODC_07805	0.71	-1.1
1,586,959	+	kefB	MCAODC_07805	0.72	+0.4
1,586,959	+	kefB	MCAODC_07805	0.72	+0.6
1,587,005	+	kefB	MCAODC_07805	0.74	-0.7
1,587,005	+	kefB	MCAODC_07805	0.74	+0.2
1,587,006	-	kefB	MCAODC_07805	0.74	+0.3
1,587,024	-	kefB	MCAODC_07805	0.75	-0.5
1,587,042	+	kefB	MCAODC_07805	0.76	+0.4
1,587,043	-	kefB	MCAODC_07805	0.77	-0.2
1,587,091	+	kefB	MCAODC_07805	0.79	-0.7
1,587,091	+	kefB	MCAODC_07805	0.79	-1.7
1,587,091	+	kefB	MCAODC_07805	0.79	-0.3
1,587,092	-	kefB	MCAODC_07805	0.79	-0.3
1,587,097	+	kefB	MCAODC_07805	0.80	-0.2
1,587,132	+	kefB	MCAODC_07805	0.82	+0.3
1,587,132	+	kefB	MCAODC_07805	0.82	+0.1
1,587,160	+	kefB	MCAODC_07805	0.83	-0.3
1,587,201	+	kefB	MCAODC_07805	0.85	+0.1
1,587,202	-	kefB	MCAODC_07805	0.85	-1.9
1,587,202	-	kefB	MCAODC_07805	0.85	+0.0
1,587,204	+	kefB	MCAODC_07805	0.86	+0.2
1,587,204	+	kefB	MCAODC_07805	0.86	-0.8
1,587,205	-	kefB	MCAODC_07805	0.86	-1.1
1,587,205	-	kefB	MCAODC_07805	0.86	+0.6
1,587,286	+				-0.0
1,587,286	+				+1.0
1,587,286	+				+0.1
1,587,287	-				-0.2
1,587,287	-				+1.1
1,587,381	+				+0.0
1,587,382	-				+1.0
1,587,458	+				-0.5
1,587,485	+				+0.7
1,587,485	+				+0.1
1,587,485	+				+0.1
1,587,493	-				-0.3
1,587,581	-	yheV	MCAODC_07810	0.42	-0.4
1,587,581	-	yheV	MCAODC_07810	0.42	+0.2
1,587,583	+	yheV	MCAODC_07810	0.43	-1.0
1,587,583	+	yheV	MCAODC_07810	0.43	-0.7
1,587,584	-	yheV	MCAODC_07810	0.43	-2.3
1,587,584	-	yheV	MCAODC_07810	0.43	-0.2
1,587,590	-	yheV	MCAODC_07810	0.46	+0.6
1,587,590	-	yheV	MCAODC_07810	0.46	-2.2
1,587,723	+				-0.2
1,587,724	-				-0.7
1,587,731	-				-1.4
1,587,766	+				-0.5
1,587,767	-				-1.8
1,587,767	-				+0.6
1,587,788	+				-1.2
1,587,799	+				+0.3
1,587,799	+				-0.7
1,587,828	+				-1.7
1,587,836	-				+0.6
1,587,836	-				+0.6
1,587,839	+				-0.3
1,587,839	+				-1.9
1,587,839	+				-0.4
1,587,839	+				-0.5
1,587,840	-				-1.3
1,587,840	-				-2.1
1,587,840	-				-1.5
1,587,891	+	slyD	MCAODC_07815	0.17	-0.5
1,587,892	-	slyD	MCAODC_07815	0.17	-3.2
1,587,993	+	slyD	MCAODC_07815	0.34	-0.2
1,587,994	-	slyD	MCAODC_07815	0.34	+0.1
1,588,002	+	slyD	MCAODC_07815	0.36	-0.8
1,588,039	+	slyD	MCAODC_07815	0.42	-1.7
1,588,039	+	slyD	MCAODC_07815	0.42	-1.8
1,588,040	-	slyD	MCAODC_07815	0.42	+0.3
1,588,040	-	slyD	MCAODC_07815	0.42	-1.4
1,588,040	-	slyD	MCAODC_07815	0.42	-0.8
1,588,066	+	slyD	MCAODC_07815	0.46	-1.2
1,588,066	+	slyD	MCAODC_07815	0.46	-1.3
1,588,067	-	slyD	MCAODC_07815	0.47	-1.2
1,588,067	-	slyD	MCAODC_07815	0.47	-0.9
1,588,067	-	slyD	MCAODC_07815	0.47	-1.7
1,588,070	+	slyD	MCAODC_07815	0.47	-0.6
1,588,070	+	slyD	MCAODC_07815	0.47	-0.5
1,588,071	-	slyD	MCAODC_07815	0.47	-3.7
1,588,071	-	slyD	MCAODC_07815	0.47	-1.2
1,588,155	-	slyD	MCAODC_07815	0.61	+0.3
1,588,380	+				-1.0
1,588,380	+				-1.5
1,588,380	+				+0.4
1,588,381	-				-0.1
1,588,381	-				-0.3
1,588,435	+				+0.3
1,588,435	+				-1.5
1,588,436	-				+0.8
1,588,494	+	slyX	MCAODC_07820	0.29	-1.0
1,588,494	+	slyX	MCAODC_07820	0.29	-0.7
1,588,495	-	slyX	MCAODC_07820	0.29	+1.9
1,588,638	+				-1.3
1,588,638	+				-1.5
1,588,639	-				+0.1
1,588,639	-				-0.5
1,588,686	+				+0.8
1,588,687	-				+0.0
1,588,690	+				+0.5
1,588,735	+				+0.1
1,588,735	+				-1.0
1,588,735	+				-0.4
1,588,736	-				-0.1
1,588,741	-				-0.1
1,588,768	+				+0.1
1,588,771	+				-0.6
1,588,771	+				+1.3
1,588,772	-				+0.7
1,588,772	-				+0.4
1,588,784	+				+0.7
1,588,784	+				+0.4
1,588,784	+				+0.6
1,588,784	+				-0.8
1,588,785	-				+0.5
1,588,785	-				-0.5
1,588,788	+				+0.5
1,588,788	+				-2.0
1,588,789	-				+0.2
1,588,789	-				-0.3
1,588,789	-				-1.0
1,588,789	-				-0.9
1,588,809	+				-2.2
1,588,810	-				+0.5
1,588,810	-				+0.4
1,588,811	+				+1.5
1,588,811	+				+1.6
1,588,811	+				+0.4
1,588,811	+				-0.0
1,588,811	+				+1.6
1,588,812	-				+0.6
1,588,812	-				-0.2
1,588,812	-				+1.0
1,588,812	-				+0.6
1,588,812	-				+1.0
1,588,814	+				+0.0
1,588,815	-				+0.2
1,588,825	+				+0.3
1,588,828	+				-0.2
1,588,828	+				-0.0
1,588,829	-				+0.2
1,588,829	-				+0.6
1,588,832	+				+0.0
1,588,832	+				+0.6
1,588,832	+				-2.3
1,588,833	-				-0.2
1,588,865	+				+0.5
1,588,866	-				+0.0
1,588,866	-				+0.5
1,588,884	+				+3.7
1,588,889	+				+0.3
1,588,889	+				+0.5
1,588,965	+	fkpA	MCAODC_07825	0.12	+0.3
1,588,966	-	fkpA	MCAODC_07825	0.12	+0.5
1,588,966	-	fkpA	MCAODC_07825	0.12	+0.4
1,588,966	-	fkpA	MCAODC_07825	0.12	+0.1
1,589,017	+	fkpA	MCAODC_07825	0.18	+0.9
1,589,017	+	fkpA	MCAODC_07825	0.18	+0.9
1,589,017	+	fkpA	MCAODC_07825	0.18	+0.6
1,589,017	+	fkpA	MCAODC_07825	0.18	+1.0
1,589,017	+	fkpA	MCAODC_07825	0.18	-0.3
1,589,018	-	fkpA	MCAODC_07825	0.18	+1.4
1,589,018	-	fkpA	MCAODC_07825	0.18	+0.3
1,589,044	+	fkpA	MCAODC_07825	0.21	+0.9
1,589,044	+	fkpA	MCAODC_07825	0.21	+1.7
1,589,045	-	fkpA	MCAODC_07825	0.22	+0.3
1,589,136	+	fkpA	MCAODC_07825	0.33	-0.7
1,589,260	+	fkpA	MCAODC_07825	0.48	+1.2
1,589,317	+	fkpA	MCAODC_07825	0.55	+0.8
1,589,324	+	fkpA	MCAODC_07825	0.56	+0.3
1,589,324	+	fkpA	MCAODC_07825	0.56	+0.6
1,589,325	-	fkpA	MCAODC_07825	0.56	+0.7
1,589,325	-	fkpA	MCAODC_07825	0.56	-0.1
1,589,327	+	fkpA	MCAODC_07825	0.56	+0.7
1,589,327	+	fkpA	MCAODC_07825	0.56	+0.9
1,589,328	-	fkpA	MCAODC_07825	0.56	-0.5
1,589,328	-	fkpA	MCAODC_07825	0.56	+0.4
1,589,365	-	fkpA	MCAODC_07825	0.61	+0.8
1,589,365	-	fkpA	MCAODC_07825	0.61	-0.1
1,589,380	+	fkpA	MCAODC_07825	0.63	+1.4