Experiment: EV146
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjeH and fxsA overlap by 180 nucleotides fxsA and aspA are separated by 336 nucleotides
MCAODC_02930: yjeH - L-methionine/branched-chain amino acid transporter, at 589,202 to 590,653
yjeH
MCAODC_02935: fxsA - membrane protein FxsA, at 590,474 to 590,950
fxsA
MCAODC_02940: aspA - aspartate ammonia-lyase, at 591,287 to 592,723
aspA
Position (kb) 590
591 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 589.555 kb on + strand, within yjeH at 589.556 kb on - strand, within yjeH at 589.556 kb on - strand, within yjeH at 589.585 kb on + strand, within yjeH at 589.586 kb on - strand, within yjeH at 589.586 kb on - strand, within yjeH at 589.604 kb on + strand, within yjeH at 589.604 kb on + strand, within yjeH at 589.604 kb on + strand, within yjeH at 589.605 kb on - strand, within yjeH at 589.605 kb on - strand, within yjeH at 589.605 kb on - strand, within yjeH at 589.606 kb on + strand, within yjeH at 589.607 kb on - strand, within yjeH at 589.607 kb on - strand, within yjeH at 589.641 kb on + strand, within yjeH at 589.663 kb on + strand, within yjeH at 589.663 kb on + strand, within yjeH at 589.717 kb on + strand, within yjeH at 589.750 kb on + strand, within yjeH at 589.750 kb on + strand, within yjeH at 589.771 kb on - strand, within yjeH at 589.771 kb on - strand, within yjeH at 589.832 kb on - strand, within yjeH at 589.890 kb on + strand, within yjeH at 589.891 kb on - strand, within yjeH at 589.895 kb on + strand, within yjeH at 589.912 kb on - strand, within yjeH at 589.935 kb on - strand, within yjeH at 589.978 kb on - strand, within yjeH at 589.980 kb on + strand, within yjeH at 589.980 kb on + strand, within yjeH at 589.980 kb on + strand, within yjeH at 589.996 kb on - strand, within yjeH at 590.019 kb on + strand, within yjeH at 590.020 kb on - strand, within yjeH at 590.020 kb on - strand, within yjeH at 590.057 kb on + strand, within yjeH at 590.057 kb on + strand, within yjeH at 590.057 kb on + strand, within yjeH at 590.057 kb on + strand, within yjeH at 590.057 kb on + strand, within yjeH at 590.058 kb on - strand, within yjeH at 590.058 kb on - strand, within yjeH at 590.058 kb on - strand, within yjeH at 590.058 kb on - strand, within yjeH at 590.061 kb on + strand, within yjeH at 590.061 kb on + strand, within yjeH at 590.061 kb on + strand, within yjeH at 590.061 kb on + strand, within yjeH at 590.062 kb on - strand, within yjeH at 590.101 kb on + strand, within yjeH at 590.101 kb on + strand, within yjeH at 590.101 kb on + strand, within yjeH at 590.101 kb on + strand, within yjeH at 590.101 kb on + strand, within yjeH at 590.102 kb on - strand, within yjeH at 590.102 kb on - strand, within yjeH at 590.115 kb on - strand, within yjeH at 590.149 kb on + strand, within yjeH at 590.209 kb on - strand, within yjeH at 590.209 kb on - strand, within yjeH at 590.230 kb on + strand, within yjeH at 590.230 kb on + strand, within yjeH at 590.230 kb on + strand, within yjeH at 590.230 kb on + strand, within yjeH at 590.231 kb on - strand, within yjeH at 590.233 kb on + strand, within yjeH at 590.234 kb on - strand, within yjeH at 590.234 kb on - strand, within yjeH at 590.234 kb on - strand, within yjeH at 590.237 kb on + strand, within yjeH at 590.254 kb on + strand, within yjeH at 590.254 kb on + strand, within yjeH at 590.254 kb on + strand, within yjeH at 590.254 kb on + strand, within yjeH at 590.255 kb on - strand, within yjeH at 590.255 kb on - strand, within yjeH at 590.257 kb on + strand, within yjeH at 590.257 kb on + strand, within yjeH at 590.272 kb on - strand, within yjeH at 590.272 kb on - strand, within yjeH at 590.272 kb on - strand, within yjeH at 590.272 kb on - strand, within yjeH at 590.290 kb on + strand, within yjeH at 590.291 kb on - strand, within yjeH at 590.316 kb on + strand, within yjeH at 590.340 kb on + strand, within yjeH at 590.340 kb on + strand, within yjeH at 590.340 kb on + strand, within yjeH at 590.353 kb on - strand, within yjeH at 590.381 kb on + strand, within yjeH at 590.381 kb on + strand, within yjeH at 590.382 kb on - strand, within yjeH at 590.382 kb on - strand, within yjeH at 590.406 kb on + strand, within yjeH at 590.475 kb on + strand at 590.475 kb on + strand at 590.476 kb on - strand at 590.476 kb on - strand at 590.476 kb on - strand at 590.549 kb on - strand at 590.552 kb on - strand at 590.732 kb on - strand, within fxsA at 590.732 kb on - strand, within fxsA at 590.806 kb on + strand, within fxsA at 590.806 kb on + strand, within fxsA at 590.806 kb on + strand, within fxsA at 590.821 kb on + strand, within fxsA at 590.841 kb on - strand, within fxsA at 590.874 kb on - strand, within fxsA at 590.874 kb on - strand, within fxsA at 590.874 kb on - strand, within fxsA at 590.874 kb on - strand, within fxsA at 590.910 kb on + strand at 590.910 kb on + strand at 590.910 kb on + strand at 590.910 kb on + strand at 590.910 kb on + strand at 590.916 kb on + strand at 590.916 kb on + strand at 590.917 kb on - strand at 590.963 kb on + strand at 590.963 kb on + strand at 590.964 kb on - strand at 590.964 kb on - strand at 590.966 kb on + strand at 591.018 kb on + strand at 591.019 kb on - strand at 591.019 kb on - strand at 591.019 kb on - strand at 591.020 kb on + strand at 591.020 kb on + strand at 591.020 kb on + strand at 591.021 kb on - strand at 591.021 kb on - strand at 591.021 kb on - strand at 591.032 kb on + strand at 591.106 kb on + strand at 591.110 kb on + strand at 591.110 kb on + strand at 591.111 kb on - strand at 591.131 kb on + strand at 591.132 kb on - strand at 591.132 kb on - strand at 591.152 kb on - strand at 591.170 kb on + strand at 591.170 kb on + strand at 591.170 kb on + strand at 591.170 kb on + strand at 591.170 kb on + strand at 591.171 kb on - strand at 591.234 kb on + strand at 591.236 kb on + strand at 591.236 kb on + strand at 591.236 kb on + strand at 591.237 kb on - strand at 591.237 kb on - strand at 591.350 kb on + strand at 591.350 kb on + strand at 591.351 kb on - strand at 591.351 kb on - strand at 591.351 kb on - strand at 591.351 kb on - strand at 591.351 kb on - strand at 591.351 kb on - strand at 591.354 kb on - strand at 591.354 kb on - strand at 591.354 kb on - strand at 591.389 kb on + strand at 591.389 kb on + strand at 591.389 kb on + strand at 591.389 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.416 kb on - strand at 591.464 kb on - strand, within aspA at 591.493 kb on + strand, within aspA at 591.493 kb on + strand, within aspA at 591.494 kb on - strand, within aspA at 591.494 kb on - strand, within aspA at 591.494 kb on - strand, within aspA at 591.595 kb on + strand, within aspA at 591.595 kb on + strand, within aspA at 591.595 kb on + strand, within aspA at 591.672 kb on - strand, within aspA at 591.755 kb on + strand, within aspA at 591.755 kb on + strand, within aspA at 591.755 kb on + strand, within aspA at 591.769 kb on + strand, within aspA at 591.777 kb on + strand, within aspA at 591.777 kb on + strand, within aspA at 591.777 kb on + strand, within aspA at 591.778 kb on - strand, within aspA at 591.778 kb on - strand, within aspA at 591.778 kb on - strand, within aspA at 591.946 kb on + strand, within aspA at 591.946 kb on + strand, within aspA at 591.947 kb on - strand, within aspA
Per-strain Table
Position Strand Gene LocusTag Fraction EV146 remove 589,555 + yjeH MCAODC_02930 0.24 +1.4 589,556 - yjeH MCAODC_02930 0.24 -2.6 589,556 - yjeH MCAODC_02930 0.24 +0.0 589,585 + yjeH MCAODC_02930 0.26 +0.9 589,586 - yjeH MCAODC_02930 0.26 +3.0 589,586 - yjeH MCAODC_02930 0.26 +1.2 589,604 + yjeH MCAODC_02930 0.28 -0.3 589,604 + yjeH MCAODC_02930 0.28 +0.5 589,604 + yjeH MCAODC_02930 0.28 -1.6 589,605 - yjeH MCAODC_02930 0.28 -0.5 589,605 - yjeH MCAODC_02930 0.28 +0.4 589,605 - yjeH MCAODC_02930 0.28 +0.1 589,606 + yjeH MCAODC_02930 0.28 +0.4 589,607 - yjeH MCAODC_02930 0.28 -1.0 589,607 - yjeH MCAODC_02930 0.28 +0.4 589,641 + yjeH MCAODC_02930 0.30 +0.5 589,663 + yjeH MCAODC_02930 0.32 -0.2 589,663 + yjeH MCAODC_02930 0.32 -0.6 589,717 + yjeH MCAODC_02930 0.35 +1.6 589,750 + yjeH MCAODC_02930 0.38 +0.8 589,750 + yjeH MCAODC_02930 0.38 -0.2 589,771 - yjeH MCAODC_02930 0.39 -0.7 589,771 - yjeH MCAODC_02930 0.39 -0.0 589,832 - yjeH MCAODC_02930 0.43 +0.6 589,890 + yjeH MCAODC_02930 0.47 -0.5 589,891 - yjeH MCAODC_02930 0.47 -0.7 589,895 + yjeH MCAODC_02930 0.48 -0.4 589,912 - yjeH MCAODC_02930 0.49 -0.1 589,935 - yjeH MCAODC_02930 0.50 +0.1 589,978 - yjeH MCAODC_02930 0.53 -0.0 589,980 + yjeH MCAODC_02930 0.54 +0.1 589,980 + yjeH MCAODC_02930 0.54 +0.4 589,980 + yjeH MCAODC_02930 0.54 +0.9 589,996 - yjeH MCAODC_02930 0.55 -0.4 590,019 + yjeH MCAODC_02930 0.56 +0.0 590,020 - yjeH MCAODC_02930 0.56 +0.1 590,020 - yjeH MCAODC_02930 0.56 -0.4 590,057 + yjeH MCAODC_02930 0.59 -0.1 590,057 + yjeH MCAODC_02930 0.59 -0.3 590,057 + yjeH MCAODC_02930 0.59 -0.2 590,057 + yjeH MCAODC_02930 0.59 -1.9 590,057 + yjeH MCAODC_02930 0.59 -1.4 590,058 - yjeH MCAODC_02930 0.59 +1.7 590,058 - yjeH MCAODC_02930 0.59 +0.2 590,058 - yjeH MCAODC_02930 0.59 -0.6 590,058 - yjeH MCAODC_02930 0.59 +0.1 590,061 + yjeH MCAODC_02930 0.59 -0.5 590,061 + yjeH MCAODC_02930 0.59 +0.2 590,061 + yjeH MCAODC_02930 0.59 +0.3 590,061 + yjeH MCAODC_02930 0.59 +0.7 590,062 - yjeH MCAODC_02930 0.59 -0.1 590,101 + yjeH MCAODC_02930 0.62 -0.1 590,101 + yjeH MCAODC_02930 0.62 +0.5 590,101 + yjeH MCAODC_02930 0.62 -0.1 590,101 + yjeH MCAODC_02930 0.62 -0.2 590,101 + yjeH MCAODC_02930 0.62 +0.1 590,102 - yjeH MCAODC_02930 0.62 -0.5 590,102 - yjeH MCAODC_02930 0.62 +1.0 590,115 - yjeH MCAODC_02930 0.63 -0.5 590,149 + yjeH MCAODC_02930 0.65 -0.3 590,209 - yjeH MCAODC_02930 0.69 +0.3 590,209 - yjeH MCAODC_02930 0.69 +0.9 590,230 + yjeH MCAODC_02930 0.71 -0.0 590,230 + yjeH MCAODC_02930 0.71 -0.7 590,230 + yjeH MCAODC_02930 0.71 -1.0 590,230 + yjeH MCAODC_02930 0.71 -0.5 590,231 - yjeH MCAODC_02930 0.71 +2.7 590,233 + yjeH MCAODC_02930 0.71 +2.8 590,234 - yjeH MCAODC_02930 0.71 +0.2 590,234 - yjeH MCAODC_02930 0.71 -1.2 590,234 - yjeH MCAODC_02930 0.71 +0.6 590,237 + yjeH MCAODC_02930 0.71 +0.1 590,254 + yjeH MCAODC_02930 0.72 +0.7 590,254 + yjeH MCAODC_02930 0.72 -0.1 590,254 + yjeH MCAODC_02930 0.72 +0.4 590,254 + yjeH MCAODC_02930 0.72 -0.7 590,255 - yjeH MCAODC_02930 0.73 +0.7 590,255 - yjeH MCAODC_02930 0.73 +0.6 590,257 + yjeH MCAODC_02930 0.73 -0.0 590,257 + yjeH MCAODC_02930 0.73 -0.4 590,272 - yjeH MCAODC_02930 0.74 +0.5 590,272 - yjeH MCAODC_02930 0.74 -1.5 590,272 - yjeH MCAODC_02930 0.74 -1.0 590,272 - yjeH MCAODC_02930 0.74 +0.4 590,290 + yjeH MCAODC_02930 0.75 +0.0 590,291 - yjeH MCAODC_02930 0.75 +0.4 590,316 + yjeH MCAODC_02930 0.77 +0.2 590,340 + yjeH MCAODC_02930 0.78 +1.0 590,340 + yjeH MCAODC_02930 0.78 +0.6 590,340 + yjeH MCAODC_02930 0.78 +0.6 590,353 - yjeH MCAODC_02930 0.79 +0.5 590,381 + yjeH MCAODC_02930 0.81 -1.5 590,381 + yjeH MCAODC_02930 0.81 -0.6 590,382 - yjeH MCAODC_02930 0.81 -1.2 590,382 - yjeH MCAODC_02930 0.81 -1.6 590,406 + yjeH MCAODC_02930 0.83 -1.0 590,475 + -2.5 590,475 + +0.5 590,476 - +1.0 590,476 - +0.4 590,476 - -0.8 590,549 - -1.5 590,552 - +0.8 590,732 - fxsA MCAODC_02935 0.54 -0.1 590,732 - fxsA MCAODC_02935 0.54 -0.2 590,806 + fxsA MCAODC_02935 0.70 +0.5 590,806 + fxsA MCAODC_02935 0.70 +0.4 590,806 + fxsA MCAODC_02935 0.70 +0.9 590,821 + fxsA MCAODC_02935 0.73 +1.0 590,841 - fxsA MCAODC_02935 0.77 +3.0 590,874 - fxsA MCAODC_02935 0.84 -1.4 590,874 - fxsA MCAODC_02935 0.84 -1.1 590,874 - fxsA MCAODC_02935 0.84 +0.4 590,874 - fxsA MCAODC_02935 0.84 +1.2 590,910 + +0.6 590,910 + -0.1 590,910 + -0.3 590,910 + +0.4 590,910 + -0.6 590,916 + -0.1 590,916 + -2.5 590,917 - -1.3 590,963 + -0.4 590,963 + -2.4 590,964 - +0.6 590,964 - +0.8 590,966 + +0.3 591,018 + -1.3 591,019 - -0.6 591,019 - +0.2 591,019 - -0.8 591,020 + -2.4 591,020 + -0.8 591,020 + -2.6 591,021 - -1.4 591,021 - -0.8 591,021 - +0.6 591,032 + +0.5 591,106 + +0.4 591,110 + -0.3 591,110 + +0.8 591,111 - -1.1 591,131 + -2.2 591,132 - +1.5 591,132 - +0.5 591,152 - -0.8 591,170 + -0.3 591,170 + -1.7 591,170 + -1.7 591,170 + +0.2 591,170 + +0.1 591,171 - -0.1 591,234 + +1.1 591,236 + +0.3 591,236 + -1.2 591,236 + +0.5 591,237 - +0.5 591,237 - -0.6 591,350 + -0.8 591,350 + +1.1 591,351 - -1.7 591,351 - -0.1 591,351 - -0.3 591,351 - +1.2 591,351 - +0.6 591,351 - -0.0 591,354 - +0.5 591,354 - +0.3 591,354 - +0.8 591,389 + -0.9 591,389 + -0.2 591,389 + +0.1 591,389 + +0.1 591,415 + +3.4 591,415 + -0.3 591,416 - +0.9 591,464 - aspA MCAODC_02940 0.12 +1.3 591,493 + aspA MCAODC_02940 0.14 +1.5 591,493 + aspA MCAODC_02940 0.14 +0.5 591,494 - aspA MCAODC_02940 0.14 +1.3 591,494 - aspA MCAODC_02940 0.14 +0.4 591,494 - aspA MCAODC_02940 0.14 +0.7 591,595 + aspA MCAODC_02940 0.21 +0.9 591,595 + aspA MCAODC_02940 0.21 -0.5 591,595 + aspA MCAODC_02940 0.21 -0.3 591,672 - aspA MCAODC_02940 0.27 +1.6 591,755 + aspA MCAODC_02940 0.33 -1.6 591,755 + aspA MCAODC_02940 0.33 +0.8 591,755 + aspA MCAODC_02940 0.33 +0.2 591,769 + aspA MCAODC_02940 0.34 +0.5 591,777 + aspA MCAODC_02940 0.34 +0.7 591,777 + aspA MCAODC_02940 0.34 -0.9 591,777 + aspA MCAODC_02940 0.34 +0.4 591,778 - aspA MCAODC_02940 0.34 -1.4 591,778 - aspA MCAODC_02940 0.34 +1.3 591,778 - aspA MCAODC_02940 0.34 -0.8 591,946 + aspA MCAODC_02940 0.46 -1.0 591,946 + aspA MCAODC_02940 0.46 +0.7 591,947 - aspA MCAODC_02940 0.46 +0.5
Or see this region's nucleotide sequence