Experiment: EV146
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt frwC and ptsA are separated by 308 nucleotides ptsA and fsa are separated by 11 nucleotides fsa and gldA are separated by 10 nucleotides
MCAODC_04130: frwC - PTS fructose transporter subunit EIIC, at 835,661 to 836,740
frwC
MCAODC_04135: ptsA - Multiphosphoryl transfer protein 2, at 837,049 to 839,550
ptsA
MCAODC_04140: fsa - fructose-6-phosphate aldolase, at 839,562 to 840,224
fsa
MCAODC_04145: gldA - bifunctional L-1,2-propanediol dehydrogenase/glycerol dehydrogenase, at 840,235 to 841,338
gldA
Position (kb) 837
838
839
840 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 836.069 kb on - strand, within frwC at 836.075 kb on - strand, within frwC at 836.075 kb on - strand, within frwC at 836.075 kb on - strand, within frwC at 836.101 kb on + strand, within frwC at 836.102 kb on - strand, within frwC at 836.102 kb on - strand, within frwC at 836.102 kb on - strand, within frwC at 836.103 kb on + strand, within frwC at 836.103 kb on + strand, within frwC at 836.103 kb on + strand, within frwC at 836.104 kb on - strand, within frwC at 836.104 kb on - strand, within frwC at 836.206 kb on + strand, within frwC at 836.206 kb on + strand, within frwC at 836.206 kb on + strand, within frwC at 836.207 kb on - strand, within frwC at 836.207 kb on - strand, within frwC at 836.267 kb on + strand, within frwC at 836.385 kb on + strand, within frwC at 836.452 kb on + strand, within frwC at 836.453 kb on - strand, within frwC at 836.453 kb on - strand, within frwC at 836.509 kb on - strand, within frwC at 836.509 kb on - strand, within frwC at 836.623 kb on - strand, within frwC at 836.623 kb on - strand, within frwC at 836.651 kb on - strand at 836.696 kb on + strand at 836.696 kb on + strand at 836.741 kb on - strand at 836.741 kb on - strand at 836.796 kb on + strand at 836.796 kb on + strand at 836.827 kb on - strand at 836.862 kb on - strand at 836.883 kb on + strand at 836.883 kb on + strand at 836.884 kb on - strand at 836.951 kb on - strand at 837.069 kb on + strand at 837.069 kb on + strand at 837.081 kb on - strand at 837.081 kb on - strand at 837.085 kb on - strand at 837.085 kb on - strand at 837.092 kb on + strand at 837.092 kb on + strand at 837.093 kb on - strand at 837.129 kb on + strand at 837.130 kb on - strand at 837.132 kb on + strand at 837.234 kb on + strand at 837.235 kb on - strand at 837.235 kb on - strand at 837.246 kb on - strand at 837.287 kb on + strand at 837.342 kb on + strand, within ptsA at 837.461 kb on + strand, within ptsA at 837.461 kb on + strand, within ptsA at 837.461 kb on + strand, within ptsA at 837.461 kb on + strand, within ptsA at 837.462 kb on - strand, within ptsA at 837.546 kb on - strand, within ptsA at 837.630 kb on + strand, within ptsA at 837.631 kb on - strand, within ptsA at 837.650 kb on + strand, within ptsA at 837.650 kb on + strand, within ptsA at 837.650 kb on + strand, within ptsA at 837.745 kb on + strand, within ptsA at 837.745 kb on + strand, within ptsA at 837.745 kb on + strand, within ptsA at 837.746 kb on - strand, within ptsA at 837.746 kb on - strand, within ptsA at 837.746 kb on - strand, within ptsA at 837.746 kb on - strand, within ptsA at 837.770 kb on + strand, within ptsA at 837.771 kb on - strand, within ptsA at 837.806 kb on - strand, within ptsA at 837.858 kb on + strand, within ptsA at 837.858 kb on + strand, within ptsA at 837.859 kb on - strand, within ptsA at 837.859 kb on - strand, within ptsA at 837.859 kb on - strand, within ptsA at 837.859 kb on - strand, within ptsA at 837.859 kb on - strand, within ptsA at 837.872 kb on + strand, within ptsA at 837.900 kb on + strand, within ptsA at 837.923 kb on + strand, within ptsA at 837.923 kb on + strand, within ptsA at 837.924 kb on - strand, within ptsA at 837.924 kb on - strand, within ptsA at 837.951 kb on + strand, within ptsA at 837.952 kb on - strand, within ptsA at 837.952 kb on - strand, within ptsA at 837.956 kb on + strand, within ptsA at 837.957 kb on - strand, within ptsA at 837.998 kb on + strand, within ptsA at 837.998 kb on + strand, within ptsA at 837.999 kb on - strand, within ptsA at 837.999 kb on - strand, within ptsA at 838.002 kb on + strand, within ptsA at 838.003 kb on - strand, within ptsA at 838.003 kb on - strand, within ptsA at 838.003 kb on - strand, within ptsA at 838.040 kb on - strand, within ptsA at 838.040 kb on - strand, within ptsA at 838.040 kb on - strand, within ptsA at 838.041 kb on + strand, within ptsA at 838.042 kb on - strand, within ptsA at 838.089 kb on - strand, within ptsA at 838.089 kb on - strand, within ptsA at 838.089 kb on - strand, within ptsA at 838.096 kb on + strand, within ptsA at 838.118 kb on + strand, within ptsA at 838.118 kb on + strand, within ptsA at 838.118 kb on + strand, within ptsA at 838.285 kb on + strand, within ptsA at 838.285 kb on + strand, within ptsA at 838.285 kb on + strand, within ptsA at 838.286 kb on - strand, within ptsA at 838.286 kb on - strand, within ptsA at 838.286 kb on - strand, within ptsA at 838.287 kb on + strand, within ptsA at 838.287 kb on + strand, within ptsA at 838.287 kb on + strand, within ptsA at 838.287 kb on + strand, within ptsA at 838.288 kb on - strand, within ptsA at 838.288 kb on - strand, within ptsA at 838.288 kb on - strand, within ptsA at 838.324 kb on + strand, within ptsA at 838.324 kb on + strand, within ptsA at 838.324 kb on + strand, within ptsA at 838.371 kb on + strand, within ptsA at 838.371 kb on + strand, within ptsA at 838.372 kb on - strand, within ptsA at 838.372 kb on - strand, within ptsA at 838.372 kb on - strand, within ptsA at 838.372 kb on - strand, within ptsA at 838.414 kb on + strand, within ptsA at 838.437 kb on + strand, within ptsA at 838.467 kb on + strand, within ptsA at 838.471 kb on + strand, within ptsA at 838.481 kb on - strand, within ptsA at 838.505 kb on + strand, within ptsA at 838.506 kb on - strand, within ptsA at 838.506 kb on - strand, within ptsA at 838.506 kb on - strand, within ptsA at 838.583 kb on + strand, within ptsA at 838.735 kb on - strand, within ptsA at 838.740 kb on + strand, within ptsA at 838.741 kb on - strand, within ptsA at 838.743 kb on + strand, within ptsA at 838.743 kb on + strand, within ptsA at 838.760 kb on - strand, within ptsA at 838.794 kb on + strand, within ptsA at 838.804 kb on + strand, within ptsA at 838.805 kb on - strand, within ptsA at 838.805 kb on - strand, within ptsA at 839.052 kb on + strand, within ptsA at 839.052 kb on + strand, within ptsA at 839.053 kb on - strand, within ptsA at 839.053 kb on - strand, within ptsA at 839.281 kb on - strand, within ptsA at 839.391 kb on + strand at 839.391 kb on + strand at 839.391 kb on + strand at 839.391 kb on + strand at 839.392 kb on - strand at 839.392 kb on - strand at 839.430 kb on + strand at 839.548 kb on + strand at 839.572 kb on - strand at 839.572 kb on - strand at 839.572 kb on - strand at 839.617 kb on + strand at 839.617 kb on + strand at 839.618 kb on - strand at 839.618 kb on - strand at 839.618 kb on - strand at 839.643 kb on - strand, within fsa at 839.870 kb on + strand, within fsa at 839.873 kb on + strand, within fsa at 839.873 kb on + strand, within fsa at 839.873 kb on + strand, within fsa at 839.874 kb on - strand, within fsa at 839.874 kb on - strand, within fsa at 839.876 kb on + strand, within fsa at 839.893 kb on + strand, within fsa at 839.893 kb on + strand, within fsa at 839.893 kb on + strand, within fsa at 839.893 kb on + strand, within fsa at 839.893 kb on + strand, within fsa at 839.894 kb on - strand, within fsa at 839.894 kb on - strand, within fsa at 839.894 kb on - strand, within fsa at 839.895 kb on + strand, within fsa at 839.896 kb on - strand, within fsa at 839.898 kb on - strand, within fsa at 839.915 kb on - strand, within fsa at 839.941 kb on - strand, within fsa at 839.941 kb on - strand, within fsa at 839.952 kb on + strand, within fsa at 839.952 kb on + strand, within fsa at 839.953 kb on - strand, within fsa at 839.953 kb on - strand, within fsa at 839.953 kb on - strand, within fsa at 839.994 kb on - strand, within fsa at 840.020 kb on - strand, within fsa at 840.124 kb on + strand, within fsa at 840.124 kb on + strand, within fsa at 840.124 kb on + strand, within fsa at 840.125 kb on - strand, within fsa at 840.131 kb on - strand, within fsa at 840.160 kb on + strand at 840.161 kb on - strand at 840.161 kb on - strand at 840.170 kb on + strand at 840.170 kb on + strand at 840.170 kb on + strand at 840.170 kb on + strand at 840.171 kb on - strand at 840.171 kb on - strand at 840.171 kb on - strand at 840.172 kb on + strand at 840.172 kb on + strand at 840.173 kb on - strand at 840.173 kb on - strand at 840.173 kb on - strand at 840.173 kb on - strand at 840.212 kb on + strand at 840.212 kb on + strand at 840.213 kb on - strand at 840.213 kb on - strand at 840.234 kb on + strand at 840.234 kb on + strand at 840.234 kb on + strand at 840.234 kb on + strand at 840.234 kb on + strand at 840.234 kb on + strand at 840.235 kb on - strand at 840.235 kb on - strand at 840.235 kb on - strand at 840.235 kb on - strand at 840.265 kb on + strand at 840.265 kb on + strand at 840.265 kb on + strand at 840.265 kb on + strand at 840.265 kb on + strand at 840.266 kb on - strand at 840.266 kb on - strand at 840.266 kb on - strand at 840.266 kb on - strand at 840.304 kb on + strand at 840.529 kb on - strand, within gldA
Per-strain Table
Position Strand Gene LocusTag Fraction EV146 remove 836,069 - frwC MCAODC_04130 0.38 +0.5 836,075 - frwC MCAODC_04130 0.38 +0.9 836,075 - frwC MCAODC_04130 0.38 +0.2 836,075 - frwC MCAODC_04130 0.38 +0.4 836,101 + frwC MCAODC_04130 0.41 -0.9 836,102 - frwC MCAODC_04130 0.41 +0.2 836,102 - frwC MCAODC_04130 0.41 -1.6 836,102 - frwC MCAODC_04130 0.41 -1.8 836,103 + frwC MCAODC_04130 0.41 -0.9 836,103 + frwC MCAODC_04130 0.41 +0.4 836,103 + frwC MCAODC_04130 0.41 -2.3 836,104 - frwC MCAODC_04130 0.41 -1.3 836,104 - frwC MCAODC_04130 0.41 +0.4 836,206 + frwC MCAODC_04130 0.50 -0.8 836,206 + frwC MCAODC_04130 0.50 -0.5 836,206 + frwC MCAODC_04130 0.50 -0.2 836,207 - frwC MCAODC_04130 0.51 +1.0 836,207 - frwC MCAODC_04130 0.51 +1.2 836,267 + frwC MCAODC_04130 0.56 +0.4 836,385 + frwC MCAODC_04130 0.67 -2.7 836,452 + frwC MCAODC_04130 0.73 +2.1 836,453 - frwC MCAODC_04130 0.73 +1.2 836,453 - frwC MCAODC_04130 0.73 -0.2 836,509 - frwC MCAODC_04130 0.79 +1.1 836,509 - frwC MCAODC_04130 0.79 +0.1 836,623 - frwC MCAODC_04130 0.89 +2.3 836,623 - frwC MCAODC_04130 0.89 +0.3 836,651 - +0.8 836,696 + +0.8 836,696 + -1.5 836,741 - +1.0 836,741 - +0.4 836,796 + -0.2 836,796 + -1.4 836,827 - -1.2 836,862 - -0.0 836,883 + -0.4 836,883 + -1.2 836,884 - -0.3 836,951 - +0.7 837,069 + +1.8 837,069 + +0.7 837,081 - +0.2 837,081 - +1.2 837,085 - +1.3 837,085 - +0.6 837,092 + +0.1 837,092 + -1.3 837,093 - -0.6 837,129 + +3.2 837,130 - +1.0 837,132 + -0.9 837,234 + -0.8 837,235 - +1.2 837,235 - +0.3 837,246 - -0.4 837,287 + +0.4 837,342 + ptsA MCAODC_04135 0.12 +0.4 837,461 + ptsA MCAODC_04135 0.16 -1.4 837,461 + ptsA MCAODC_04135 0.16 -0.5 837,461 + ptsA MCAODC_04135 0.16 +0.2 837,461 + ptsA MCAODC_04135 0.16 -1.4 837,462 - ptsA MCAODC_04135 0.17 -2.0 837,546 - ptsA MCAODC_04135 0.20 -0.3 837,630 + ptsA MCAODC_04135 0.23 -0.7 837,631 - ptsA MCAODC_04135 0.23 +2.1 837,650 + ptsA MCAODC_04135 0.24 -1.9 837,650 + ptsA MCAODC_04135 0.24 -0.1 837,650 + ptsA MCAODC_04135 0.24 -0.5 837,745 + ptsA MCAODC_04135 0.28 +0.4 837,745 + ptsA MCAODC_04135 0.28 +0.9 837,745 + ptsA MCAODC_04135 0.28 +0.7 837,746 - ptsA MCAODC_04135 0.28 -1.1 837,746 - ptsA MCAODC_04135 0.28 -0.4 837,746 - ptsA MCAODC_04135 0.28 -0.3 837,746 - ptsA MCAODC_04135 0.28 -1.1 837,770 + ptsA MCAODC_04135 0.29 -1.3 837,771 - ptsA MCAODC_04135 0.29 -0.5 837,806 - ptsA MCAODC_04135 0.30 +1.2 837,858 + ptsA MCAODC_04135 0.32 -0.4 837,858 + ptsA MCAODC_04135 0.32 -0.7 837,859 - ptsA MCAODC_04135 0.32 +0.5 837,859 - ptsA MCAODC_04135 0.32 -0.2 837,859 - ptsA MCAODC_04135 0.32 -0.5 837,859 - ptsA MCAODC_04135 0.32 +0.2 837,859 - ptsA MCAODC_04135 0.32 -0.1 837,872 + ptsA MCAODC_04135 0.33 -0.7 837,900 + ptsA MCAODC_04135 0.34 -0.7 837,923 + ptsA MCAODC_04135 0.35 -0.3 837,923 + ptsA MCAODC_04135 0.35 +0.6 837,924 - ptsA MCAODC_04135 0.35 -0.5 837,924 - ptsA MCAODC_04135 0.35 +0.7 837,951 + ptsA MCAODC_04135 0.36 -0.8 837,952 - ptsA MCAODC_04135 0.36 +0.7 837,952 - ptsA MCAODC_04135 0.36 +0.7 837,956 + ptsA MCAODC_04135 0.36 +2.0 837,957 - ptsA MCAODC_04135 0.36 -0.5 837,998 + ptsA MCAODC_04135 0.38 -0.6 837,998 + ptsA MCAODC_04135 0.38 -0.2 837,999 - ptsA MCAODC_04135 0.38 -0.9 837,999 - ptsA MCAODC_04135 0.38 +0.7 838,002 + ptsA MCAODC_04135 0.38 -1.0 838,003 - ptsA MCAODC_04135 0.38 +1.3 838,003 - ptsA MCAODC_04135 0.38 +0.3 838,003 - ptsA MCAODC_04135 0.38 -0.4 838,040 - ptsA MCAODC_04135 0.40 +0.6 838,040 - ptsA MCAODC_04135 0.40 -2.0 838,040 - ptsA MCAODC_04135 0.40 -0.4 838,041 + ptsA MCAODC_04135 0.40 -1.3 838,042 - ptsA MCAODC_04135 0.40 -0.3 838,089 - ptsA MCAODC_04135 0.42 -0.1 838,089 - ptsA MCAODC_04135 0.42 -1.0 838,089 - ptsA MCAODC_04135 0.42 +1.0 838,096 + ptsA MCAODC_04135 0.42 -0.1 838,118 + ptsA MCAODC_04135 0.43 +2.3 838,118 + ptsA MCAODC_04135 0.43 +0.8 838,118 + ptsA MCAODC_04135 0.43 +1.0 838,285 + ptsA MCAODC_04135 0.49 +0.7 838,285 + ptsA MCAODC_04135 0.49 +1.2 838,285 + ptsA MCAODC_04135 0.49 +0.7 838,286 - ptsA MCAODC_04135 0.49 -0.4 838,286 - ptsA MCAODC_04135 0.49 -2.2 838,286 - ptsA MCAODC_04135 0.49 -1.2 838,287 + ptsA MCAODC_04135 0.49 +0.2 838,287 + ptsA MCAODC_04135 0.49 -0.3 838,287 + ptsA MCAODC_04135 0.49 +0.5 838,287 + ptsA MCAODC_04135 0.49 -1.1 838,288 - ptsA MCAODC_04135 0.50 +0.4 838,288 - ptsA MCAODC_04135 0.50 +0.4 838,288 - ptsA MCAODC_04135 0.50 +0.5 838,324 + ptsA MCAODC_04135 0.51 -0.6 838,324 + ptsA MCAODC_04135 0.51 +0.9 838,324 + ptsA MCAODC_04135 0.51 -0.9 838,371 + ptsA MCAODC_04135 0.53 +2.3 838,371 + ptsA MCAODC_04135 0.53 -0.8 838,372 - ptsA MCAODC_04135 0.53 +0.3 838,372 - ptsA MCAODC_04135 0.53 +1.0 838,372 - ptsA MCAODC_04135 0.53 -0.0 838,372 - ptsA MCAODC_04135 0.53 +0.7 838,414 + ptsA MCAODC_04135 0.55 +0.3 838,437 + ptsA MCAODC_04135 0.55 +0.3 838,467 + ptsA MCAODC_04135 0.57 -0.5 838,471 + ptsA MCAODC_04135 0.57 +0.4 838,481 - ptsA MCAODC_04135 0.57 +0.0 838,505 + ptsA MCAODC_04135 0.58 -0.7 838,506 - ptsA MCAODC_04135 0.58 -0.9 838,506 - ptsA MCAODC_04135 0.58 +1.4 838,506 - ptsA MCAODC_04135 0.58 +0.4 838,583 + ptsA MCAODC_04135 0.61 +1.4 838,735 - ptsA MCAODC_04135 0.67 +0.6 838,740 + ptsA MCAODC_04135 0.68 -0.4 838,741 - ptsA MCAODC_04135 0.68 -1.7 838,743 + ptsA MCAODC_04135 0.68 -1.4 838,743 + ptsA MCAODC_04135 0.68 -0.2 838,760 - ptsA MCAODC_04135 0.68 -0.5 838,794 + ptsA MCAODC_04135 0.70 +0.2 838,804 + ptsA MCAODC_04135 0.70 +0.5 838,805 - ptsA MCAODC_04135 0.70 -1.7 838,805 - ptsA MCAODC_04135 0.70 +0.7 839,052 + ptsA MCAODC_04135 0.80 -0.7 839,052 + ptsA MCAODC_04135 0.80 +0.3 839,053 - ptsA MCAODC_04135 0.80 +0.5 839,053 - ptsA MCAODC_04135 0.80 -0.4 839,281 - ptsA MCAODC_04135 0.89 +0.3 839,391 + -0.3 839,391 + +0.9 839,391 + +0.2 839,391 + -0.6 839,392 - -2.1 839,392 - -0.6 839,430 + +0.5 839,548 + -0.3 839,572 - +0.3 839,572 - +0.1 839,572 - -0.3 839,617 + -0.7 839,617 + -0.5 839,618 - -1.1 839,618 - -0.5 839,618 - +1.5 839,643 - fsa MCAODC_04140 0.12 -1.9 839,870 + fsa MCAODC_04140 0.46 +0.6 839,873 + fsa MCAODC_04140 0.47 +0.7 839,873 + fsa MCAODC_04140 0.47 -0.4 839,873 + fsa MCAODC_04140 0.47 -1.7 839,874 - fsa MCAODC_04140 0.47 +0.1 839,874 - fsa MCAODC_04140 0.47 -0.8 839,876 + fsa MCAODC_04140 0.47 +2.2 839,893 + fsa MCAODC_04140 0.50 +0.8 839,893 + fsa MCAODC_04140 0.50 +0.7 839,893 + fsa MCAODC_04140 0.50 +1.0 839,893 + fsa MCAODC_04140 0.50 +2.3 839,893 + fsa MCAODC_04140 0.50 +0.7 839,894 - fsa MCAODC_04140 0.50 +0.3 839,894 - fsa MCAODC_04140 0.50 -0.7 839,894 - fsa MCAODC_04140 0.50 -1.4 839,895 + fsa MCAODC_04140 0.50 -0.2 839,896 - fsa MCAODC_04140 0.50 -2.2 839,898 - fsa MCAODC_04140 0.51 -1.7 839,915 - fsa MCAODC_04140 0.53 -1.5 839,941 - fsa MCAODC_04140 0.57 +0.2 839,941 - fsa MCAODC_04140 0.57 +0.6 839,952 + fsa MCAODC_04140 0.59 +0.2 839,952 + fsa MCAODC_04140 0.59 -0.2 839,953 - fsa MCAODC_04140 0.59 +0.5 839,953 - fsa MCAODC_04140 0.59 -1.3 839,953 - fsa MCAODC_04140 0.59 -0.1 839,994 - fsa MCAODC_04140 0.65 -0.8 840,020 - fsa MCAODC_04140 0.69 -0.4 840,124 + fsa MCAODC_04140 0.85 +0.6 840,124 + fsa MCAODC_04140 0.85 -0.4 840,124 + fsa MCAODC_04140 0.85 -0.9 840,125 - fsa MCAODC_04140 0.85 -0.6 840,131 - fsa MCAODC_04140 0.86 +0.8 840,160 + +0.8 840,161 - -0.1 840,161 - +1.1 840,170 + +0.7 840,170 + -1.9 840,170 + +0.7 840,170 + +0.7 840,171 - -1.2 840,171 - +0.6 840,171 - -0.0 840,172 + -1.2 840,172 + -2.4 840,173 - -2.1 840,173 - +0.6 840,173 - +1.8 840,173 - +0.9 840,212 + -2.4 840,212 + +0.2 840,213 - -0.1 840,213 - -2.1 840,234 + +0.8 840,234 + +0.3 840,234 + -0.2 840,234 + +0.1 840,234 + +1.2 840,234 + +1.3 840,235 - -0.6 840,235 - -1.1 840,235 - +1.3 840,235 - -0.5 840,265 + +1.7 840,265 + -1.7 840,265 + -1.7 840,265 + +2.2 840,265 + -0.2 840,266 - -0.1 840,266 - +0.7 840,266 - +0.2 840,266 - +1.4 840,304 + -1.0 840,529 - gldA MCAODC_04145 0.27 +4.3
Or see this region's nucleotide sequence