Strain Fitness in Escherichia coli ECRC101 around MCAODC_24060

Experiment: T2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	T2
1,536,062	-	agp	MCAODC_24050	0.72	-2.2
1,536,081	+	agp	MCAODC_24050	0.74	+0.6
1,536,088	-	agp	MCAODC_24050	0.74	-1.7
1,536,123	-	agp	MCAODC_24050	0.77	+1.1
1,536,123	-	agp	MCAODC_24050	0.77	+0.6
1,536,123	-	agp	MCAODC_24050	0.77	+0.2
1,536,156	+	agp	MCAODC_24050	0.80	+1.7
1,536,156	+	agp	MCAODC_24050	0.80	+0.5
1,536,157	-	agp	MCAODC_24050	0.80	+0.0
1,536,168	+	agp	MCAODC_24050	0.81	-0.3
1,536,168	+	agp	MCAODC_24050	0.81	-0.2
1,536,168	+	agp	MCAODC_24050	0.81	+1.7
1,536,168	+	agp	MCAODC_24050	0.81	-1.3
1,536,168	+	agp	MCAODC_24050	0.81	-1.4
1,536,168	+	agp	MCAODC_24050	0.81	-2.0
1,536,169	-	agp	MCAODC_24050	0.81	+0.6
1,536,169	-	agp	MCAODC_24050	0.81	-1.3
1,536,169	-	agp	MCAODC_24050	0.81	-0.7
1,536,169	-	agp	MCAODC_24050	0.81	-0.9
1,536,169	-	agp	MCAODC_24050	0.81	+1.0
1,536,169	-	agp	MCAODC_24050	0.81	-0.3
1,536,180	-	agp	MCAODC_24050	0.81	-0.6
1,536,284	+	agp	MCAODC_24050	0.90	+0.3
1,536,285	-				-0.3
1,536,285	-				-0.3
1,536,285	-				+1.4
1,536,289	+				+0.6
1,536,371	+				-1.1
1,536,549	+				-1.5
1,536,550	-				-0.6
1,536,702	-				-1.0
1,536,889	-		MCAODC_24055	0.76	-1.2
1,537,030	+				+0.7
1,537,161	-		MCAODC_24060	0.11	-3.1
1,537,998	+				+0.6
1,538,115	+				-0.6
1,538,115	+				-0.3
1,538,115	+				+0.3
1,538,115	+				+0.0
1,538,115	+				-0.6
1,538,115	+				-0.2
1,538,116	-				+0.0
1,538,158	+				+0.9
1,538,159	-				-1.3
1,538,159	-				-0.6
1,538,160	+				-0.0
1,538,160	+				+3.0
1,538,161	-				-0.9
1,538,161	-				+1.4
1,538,216	+				-0.3
1,538,310	+	cbpA	MCAODC_24065	0.10	+0.4
1,538,383	+	cbpA	MCAODC_24065	0.18	-0.0
1,538,409	+	cbpA	MCAODC_24065	0.21	-0.1
1,538,410	-	cbpA	MCAODC_24065	0.21	-0.3
1,538,447	+	cbpA	MCAODC_24065	0.25	-1.7
1,538,504	+	cbpA	MCAODC_24065	0.31	-1.2
1,538,612	+	cbpA	MCAODC_24065	0.43	+0.0
1,538,621	+	cbpA	MCAODC_24065	0.44	-0.0
1,538,637	+	cbpA	MCAODC_24065	0.46	-2.0
1,538,637	+	cbpA	MCAODC_24065	0.46	-0.4
1,538,637	+	cbpA	MCAODC_24065	0.46	-0.6
1,538,638	-	cbpA	MCAODC_24065	0.46	+0.2
1,538,638	-	cbpA	MCAODC_24065	0.46	+2.2
1,538,808	-	cbpA	MCAODC_24065	0.64	+1.2
1,538,937	-	cbpA	MCAODC_24065	0.78	-2.3