Strain Fitness in Escherichia coli ECRC101 around MCAODC_18785
Experiment: T2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | T2 |
|---|---|---|---|---|---|
| remove | |||||
| 611,912 | - | dmlR | MCAODC_18780 | 0.17 | -0.9 |
| 611,912 | - | dmlR | MCAODC_18780 | 0.17 | +0.4 |
| 611,912 | - | dmlR | MCAODC_18780 | 0.17 | +0.3 |
| 611,912 | - | dmlR | MCAODC_18780 | 0.17 | -2.2 |
| 612,054 | + | dmlR | MCAODC_18780 | 0.32 | -1.3 |
| 612,305 | - | dmlR | MCAODC_18780 | 0.59 | +0.3 |
| 612,305 | - | dmlR | MCAODC_18780 | 0.59 | +1.5 |
| 612,385 | - | dmlR | MCAODC_18780 | 0.68 | +0.4 |
| 612,385 | - | dmlR | MCAODC_18780 | 0.68 | -0.4 |
| 612,385 | - | dmlR | MCAODC_18780 | 0.68 | -1.3 |
| 612,387 | + | dmlR | MCAODC_18780 | 0.68 | +1.4 |
| 612,476 | + | dmlR | MCAODC_18780 | 0.78 | -0.4 |
| 612,476 | + | dmlR | MCAODC_18780 | 0.78 | +1.3 |
| 612,643 | - | -0.7 | |||
| 612,693 | + | -0.8 | |||
| 612,736 | - | -2.2 | |||
| 612,738 | - | -0.1 | |||
| 612,738 | - | +0.7 | |||
| 612,934 | + | dmlA | MCAODC_18785 | 0.14 | +0.9 |
| 612,948 | + | dmlA | MCAODC_18785 | 0.15 | -2.1 |
| 612,949 | - | dmlA | MCAODC_18785 | 0.15 | +0.6 |
| 613,000 | + | dmlA | MCAODC_18785 | 0.20 | +0.4 |
| 613,000 | + | dmlA | MCAODC_18785 | 0.20 | -0.9 |
| 613,041 | + | dmlA | MCAODC_18785 | 0.24 | +0.7 |
| 613,042 | - | dmlA | MCAODC_18785 | 0.24 | +0.7 |
| 613,090 | + | dmlA | MCAODC_18785 | 0.28 | -1.1 |
| 613,090 | + | dmlA | MCAODC_18785 | 0.28 | -1.6 |
| 613,233 | + | dmlA | MCAODC_18785 | 0.41 | -0.7 |
| 613,332 | + | dmlA | MCAODC_18785 | 0.50 | -1.1 |
| 613,353 | + | dmlA | MCAODC_18785 | 0.52 | +0.4 |
| 613,353 | + | dmlA | MCAODC_18785 | 0.52 | -1.6 |
| 613,449 | + | dmlA | MCAODC_18785 | 0.61 | -0.3 |
| 613,652 | - | dmlA | MCAODC_18785 | 0.80 | +0.5 |
| 613,978 | - | +1.8 | |||
| 614,102 | - | -0.0 | |||
| 614,102 | - | -0.1 | |||
| 614,135 | - | -1.4 | |||
| 614,283 | + | yeaV | MCAODC_18790 | 0.10 | -0.9 |
| 614,316 | - | yeaV | MCAODC_18790 | 0.12 | -0.0 |
| 614,422 | + | yeaV | MCAODC_18790 | 0.19 | -2.7 |
| 614,454 | - | yeaV | MCAODC_18790 | 0.21 | -1.1 |
| 614,457 | - | yeaV | MCAODC_18790 | 0.21 | +0.9 |
| 614,563 | + | yeaV | MCAODC_18790 | 0.27 | +0.4 |
| 614,564 | - | yeaV | MCAODC_18790 | 0.28 | +0.7 |
| 614,564 | - | yeaV | MCAODC_18790 | 0.28 | +0.8 |
| 614,726 | - | yeaV | MCAODC_18790 | 0.38 | +0.6 |
Or see this region's nucleotide sequence