Strain Fitness in Escherichia coli ECRC101 around MCAODC_08690

Experiment: T2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	T2
1,739,406	+	yhbW	MCAODC_08685	0.16	+0.4
1,739,407	-	yhbW	MCAODC_08685	0.16	+0.4
1,739,407	-	yhbW	MCAODC_08685	0.16	-2.3
1,739,461	-	yhbW	MCAODC_08685	0.22	+0.6
1,739,533	-	yhbW	MCAODC_08685	0.29	+1.3
1,739,574	+	yhbW	MCAODC_08685	0.33	-1.6
1,739,574	+	yhbW	MCAODC_08685	0.33	-1.7
1,739,575	-	yhbW	MCAODC_08685	0.33	-0.5
1,739,575	-	yhbW	MCAODC_08685	0.33	-0.7
1,739,594	+	yhbW	MCAODC_08685	0.35	+0.2
1,739,740	+	yhbW	MCAODC_08685	0.49	+1.6
1,739,768	+	yhbW	MCAODC_08685	0.52	+0.3
1,739,879	-	yhbW	MCAODC_08685	0.63	+1.0
1,739,946	-	yhbW	MCAODC_08685	0.70	+0.3
1,739,952	+	yhbW	MCAODC_08685	0.70	-0.1
1,739,953	-	yhbW	MCAODC_08685	0.71	-0.5
1,739,953	-	yhbW	MCAODC_08685	0.71	+0.8
1,739,953	-	yhbW	MCAODC_08685	0.71	+1.0
1,739,953	-	yhbW	MCAODC_08685	0.71	-0.8
1,739,953	-	yhbW	MCAODC_08685	0.71	-1.5
1,740,039	+	yhbW	MCAODC_08685	0.79	-0.1
1,740,040	-	yhbW	MCAODC_08685	0.79	+0.6
1,740,054	-	yhbW	MCAODC_08685	0.81	-0.3
1,740,096	+	yhbW	MCAODC_08685	0.85	-3.1
1,740,096	+	yhbW	MCAODC_08685	0.85	-1.0
1,740,119	+	yhbW	MCAODC_08685	0.87	-1.0
1,740,241	-				-1.3
1,740,273	-				+0.1
1,740,282	+				+0.6
1,740,282	+				-0.3
1,740,282	+				+0.6
1,740,290	+				+1.1
1,740,291	-				+1.4
1,740,298	-				-1.4
1,740,302	-				-1.1
1,740,327	+				+0.1
1,740,328	-				-0.2
1,740,328	-				+1.0
1,740,331	+				+1.4
1,740,331	+				-0.3
1,740,331	+				+0.7
1,740,332	-				+0.7
1,740,368	-				-0.1
1,740,368	-				-0.3
1,740,562	-	rlhA	MCAODC_08690	0.26	-0.3
1,740,562	-	rlhA	MCAODC_08690	0.26	+0.1
1,740,562	-	rlhA	MCAODC_08690	0.26	-1.1
1,740,614	+	rlhA	MCAODC_08690	0.32	+0.2
1,740,614	+	rlhA	MCAODC_08690	0.32	-0.2
1,740,614	+	rlhA	MCAODC_08690	0.32	-0.5
1,740,614	+	rlhA	MCAODC_08690	0.32	+0.6
1,740,615	-	rlhA	MCAODC_08690	0.32	+0.7
1,740,693	+	rlhA	MCAODC_08690	0.41	-1.4
1,740,694	-	rlhA	MCAODC_08690	0.41	+1.6
1,740,704	-	rlhA	MCAODC_08690	0.43	+0.0
1,740,704	-	rlhA	MCAODC_08690	0.43	+0.2
1,740,800	+	rlhA	MCAODC_08690	0.53	-0.4
1,740,800	+	rlhA	MCAODC_08690	0.53	+0.9
1,740,800	+	rlhA	MCAODC_08690	0.53	-0.2
1,740,801	-	rlhA	MCAODC_08690	0.54	+0.9
1,740,801	-	rlhA	MCAODC_08690	0.54	-0.1
1,740,801	-	rlhA	MCAODC_08690	0.54	+0.4
1,740,851	+	rlhA	MCAODC_08690	0.59	-0.4
1,740,853	+	rlhA	MCAODC_08690	0.59	-0.6
1,740,853	+	rlhA	MCAODC_08690	0.59	+2.5
1,740,854	-	rlhA	MCAODC_08690	0.60	-0.4
1,740,854	-	rlhA	MCAODC_08690	0.60	+1.7
1,740,854	-	rlhA	MCAODC_08690	0.60	+1.1
1,740,905	+	rlhA	MCAODC_08690	0.65	-1.6
1,740,905	+	rlhA	MCAODC_08690	0.65	-1.0
1,740,906	-	rlhA	MCAODC_08690	0.66	+1.0
1,740,958	+	rlhA	MCAODC_08690	0.71	+0.8
1,740,959	-	rlhA	MCAODC_08690	0.72	+0.2
1,740,959	-	rlhA	MCAODC_08690	0.72	+1.0
1,741,178	-				-0.7
1,741,195	-				-2.4
1,741,201	+				+0.9
1,741,236	+				-0.2
1,741,327	+		MCAODC_08695	0.11	+0.2
1,741,328	-		MCAODC_08695	0.11	-0.2
1,741,328	-		MCAODC_08695	0.11	+2.6
1,741,328	-		MCAODC_08695	0.11	+1.2
1,741,374	+		MCAODC_08695	0.16	-0.2
1,741,375	-		MCAODC_08695	0.16	-1.3
1,741,385	-		MCAODC_08695	0.17	+0.1
1,741,385	-		MCAODC_08695	0.17	+0.4
1,741,516	+		MCAODC_08695	0.30	-0.4
1,741,516	+		MCAODC_08695	0.30	+0.0
1,741,516	+		MCAODC_08695	0.30	-1.1
1,741,516	+		MCAODC_08695	0.30	-0.8
1,741,516	+		MCAODC_08695	0.30	-0.7
1,741,516	+		MCAODC_08695	0.30	+0.3
1,741,517	-		MCAODC_08695	0.30	-1.6
1,741,517	-		MCAODC_08695	0.30	-0.7
1,741,683	+		MCAODC_08695	0.47	+0.8
1,741,684	-		MCAODC_08695	0.47	+0.5
1,741,703	-		MCAODC_08695	0.49	-0.5
1,741,703	-		MCAODC_08695	0.49	+0.6
1,741,703	-		MCAODC_08695	0.49	-0.5
1,741,828	-		MCAODC_08695	0.61	-0.5
1,741,885	+		MCAODC_08695	0.67	-0.1
1,741,886	-		MCAODC_08695	0.67	-0.9
1,741,913	+		MCAODC_08695	0.70	-0.7
1,741,913	+		MCAODC_08695	0.70	-1.2
1,741,913	+		MCAODC_08695	0.70	+0.2
1,741,914	-		MCAODC_08695	0.70	-0.0
1,741,914	-		MCAODC_08695	0.70	+1.1
1,742,119	+				+1.0
1,742,119	+				+2.4
1,742,120	-				-0.8
1,742,120	-				-0.2
1,742,138	-				-0.1
1,742,140	-				+0.1
1,742,140	-				-1.4
1,742,140	-				-1.2