Strain Fitness in Pseudomonas sp. RS175 around PFR28_04180

Experiment: gluconate (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	gluconate (C) 10 mM
4,780,746	+		PFR28_04179	0.73	+0.0
4,780,746	+		PFR28_04179	0.73	-0.0
4,780,800	+		PFR28_04179	0.76	-0.1
4,780,800	+		PFR28_04179	0.76	+1.1
4,780,801	-		PFR28_04179	0.76	+0.8
4,781,061	+		PFR28_04179	0.89	-0.6
4,781,061	+		PFR28_04179	0.89	+1.0
4,781,062	-		PFR28_04179	0.89	-0.1
4,781,062	-		PFR28_04179	0.89	+0.7
4,781,062	-		PFR28_04179	0.89	-0.1
4,781,131	+				+1.2
4,781,131	+				+0.2
4,781,132	-				-0.2
4,781,140	+				-1.2
4,781,141	-				-1.7
4,781,141	-				-0.3
4,781,338	-				-0.6
4,781,380	+				-0.6
4,781,380	+				-0.1
4,781,380	+				+0.9
4,781,380	+				+0.6
4,781,380	+				+0.4
4,781,380	+				-0.2
4,781,380	+				+0.3
4,781,380	+				+0.6
4,781,380	+				+0.7
4,781,381	-				-2.1
4,781,381	-				-0.4
4,781,381	-				+0.1
4,781,381	-				+1.0
4,781,381	-				-0.6
4,781,381	-				-0.3
4,781,453	+				+0.1
4,781,453	+				+0.8
4,781,453	+				-0.0
4,781,454	-				+0.3
4,781,454	-				+0.2
4,781,454	-				-0.4
4,781,469	+				-0.4
4,781,481	-				-0.7
4,781,492	+				-0.2
4,781,492	+				+0.7
4,781,493	-				-0.4
4,781,493	-				+0.6
4,781,572	+				-0.0
4,781,572	+				+1.4
4,781,572	+				-0.2
4,781,573	-				+1.3
4,781,573	-				+0.1
4,781,668	-				+0.3
4,781,728	+				+0.1
4,781,729	-				-0.2
4,781,729	-				+0.9
4,781,729	-				-0.8
4,781,729	-				+0.4
4,781,758	+				-0.3
4,781,813	+		PFR28_04180	0.14	-0.5
4,781,813	+		PFR28_04180	0.14	-0.0
4,781,813	+		PFR28_04180	0.14	-0.0
4,781,813	+		PFR28_04180	0.14	-0.0
4,781,814	-		PFR28_04180	0.14	-0.8
4,781,814	-		PFR28_04180	0.14	-0.1
4,781,814	-		PFR28_04180	0.14	-0.3
4,781,814	-		PFR28_04180	0.14	+0.1
4,781,885	+		PFR28_04180	0.25	+0.8
4,781,885	+		PFR28_04180	0.25	-0.3
4,781,885	+		PFR28_04180	0.25	+1.0
4,781,886	-		PFR28_04180	0.25	-0.2
4,781,912	+		PFR28_04180	0.29	+0.2
4,781,912	+		PFR28_04180	0.29	+0.0
4,781,912	+		PFR28_04180	0.29	-0.8
4,781,912	+		PFR28_04180	0.29	-0.0
4,781,913	-		PFR28_04180	0.29	-0.6
4,781,913	-		PFR28_04180	0.29	+0.3
4,781,942	+		PFR28_04180	0.34	+0.6
4,781,956	+		PFR28_04180	0.36	+1.4
4,782,028	+		PFR28_04180	0.46	+0.1
4,782,028	+		PFR28_04180	0.46	-0.1
4,782,065	+		PFR28_04180	0.52	-0.3
4,782,065	+		PFR28_04180	0.52	-0.3
4,782,066	-		PFR28_04180	0.52	+0.1
4,782,071	+		PFR28_04180	0.53	-0.3
4,782,071	+		PFR28_04180	0.53	+0.4
4,782,071	+		PFR28_04180	0.53	+0.1
4,782,072	-		PFR28_04180	0.53	-0.4
4,782,072	-		PFR28_04180	0.53	-0.1
4,782,072	-		PFR28_04180	0.53	+0.8
4,782,072	-		PFR28_04180	0.53	-0.6
4,782,080	+		PFR28_04180	0.54	-0.2
4,782,080	+		PFR28_04180	0.54	-0.2
4,782,080	+		PFR28_04180	0.54	+0.4
4,782,080	+		PFR28_04180	0.54	+0.6
4,782,080	+		PFR28_04180	0.54	-0.4
4,782,081	-		PFR28_04180	0.54	+0.0
4,782,081	-		PFR28_04180	0.54	-0.2
4,782,081	-		PFR28_04180	0.54	+0.4
4,782,081	-		PFR28_04180	0.54	+0.1
4,782,081	-		PFR28_04180	0.54	-1.2
4,782,111	+		PFR28_04180	0.59	-0.2
4,782,111	+		PFR28_04180	0.59	+0.6
4,782,111	+		PFR28_04180	0.59	+4.2
4,782,111	+		PFR28_04180	0.59	-0.7
4,782,112	-		PFR28_04180	0.59	+0.3
4,782,112	-		PFR28_04180	0.59	-1.1
4,782,112	-		PFR28_04180	0.59	-1.1
4,782,165	+		PFR28_04180	0.67	+0.6
4,782,165	+		PFR28_04180	0.67	+0.6
4,782,166	-		PFR28_04180	0.67	+0.1
4,782,240	-		PFR28_04180	0.78	-0.5
4,782,240	-		PFR28_04180	0.78	-0.1
4,782,240	-		PFR28_04180	0.78	-0.4
4,782,241	+		PFR28_04180	0.78	+0.2
4,782,241	+		PFR28_04180	0.78	+0.6
4,782,241	+		PFR28_04180	0.78	+0.1
4,782,241	+		PFR28_04180	0.78	+0.8
4,782,242	-		PFR28_04180	0.78	-0.2
4,782,242	-		PFR28_04180	0.78	-1.0
4,782,242	-		PFR28_04180	0.78	+0.2
4,782,287	+		PFR28_04180	0.85	-0.2
4,782,288	-		PFR28_04180	0.85	-0.8
4,782,305	+		PFR28_04180	0.88	-0.6
4,782,306	-		PFR28_04180	0.88	+0.3
4,782,306	-		PFR28_04180	0.88	-1.1
4,782,326	+				+0.3
4,782,584	+				-0.4
4,782,597	+				-0.2
4,782,615	+				+0.6
4,782,622	+				-1.9
4,782,622	+				+0.0
4,782,623	-				+0.1
4,782,623	-				-1.2
4,782,729	+		PFR28_04181	0.14	+1.2
4,782,729	+		PFR28_04181	0.14	+0.6
4,782,729	+		PFR28_04181	0.14	-0.1
4,782,729	+		PFR28_04181	0.14	-0.9
4,782,729	+		PFR28_04181	0.14	+0.2
4,782,730	-		PFR28_04181	0.14	-0.4
4,782,730	-		PFR28_04181	0.14	-0.9
4,782,730	-		PFR28_04181	0.14	-0.7
4,782,730	-		PFR28_04181	0.14	-0.1
4,782,733	+		PFR28_04181	0.14	-1.2
4,782,733	+		PFR28_04181	0.14	-0.5
4,782,733	+		PFR28_04181	0.14	+0.3
4,782,733	+		PFR28_04181	0.14	+0.4
4,782,734	-		PFR28_04181	0.14	+0.6
4,782,760	+		PFR28_04181	0.18	+0.6
4,782,760	+		PFR28_04181	0.18	+0.0
4,782,760	+		PFR28_04181	0.18	+0.2
4,782,761	-		PFR28_04181	0.19	+0.1
4,782,806	-		PFR28_04181	0.25	+0.1
4,782,832	+		PFR28_04181	0.29	-0.6
4,782,832	+		PFR28_04181	0.29	+0.0
4,782,832	+		PFR28_04181	0.29	+0.5
4,782,832	+		PFR28_04181	0.29	+0.6
4,782,832	+		PFR28_04181	0.29	-0.1
4,782,832	+		PFR28_04181	0.29	-0.5
4,782,832	+		PFR28_04181	0.29	+0.7
4,782,832	+		PFR28_04181	0.29	+0.5
4,782,832	+		PFR28_04181	0.29	+0.1
4,782,832	+		PFR28_04181	0.29	-0.7
4,782,832	+		PFR28_04181	0.29	+1.4
4,782,832	+		PFR28_04181	0.29	+0.7
4,782,832	+		PFR28_04181	0.29	-0.9
4,782,832	+		PFR28_04181	0.29	+0.7
4,782,833	-		PFR28_04181	0.29	-0.6
4,782,833	-		PFR28_04181	0.29	+0.3
4,782,833	-		PFR28_04181	0.29	-0.3
4,782,833	-		PFR28_04181	0.29	+0.3
4,782,833	-		PFR28_04181	0.29	+0.7
4,782,833	-		PFR28_04181	0.29	+0.6
4,782,833	-		PFR28_04181	0.29	-0.6
4,782,833	-		PFR28_04181	0.29	-0.1
4,782,834	+		PFR28_04181	0.29	-1.4
4,782,834	+		PFR28_04181	0.29	+0.9
4,782,835	-		PFR28_04181	0.30	-0.1
4,782,986	-		PFR28_04181	0.52	-0.6
4,782,991	+		PFR28_04181	0.53	-0.9
4,782,991	+		PFR28_04181	0.53	-0.2
4,782,991	+		PFR28_04181	0.53	+0.8
4,782,991	+		PFR28_04181	0.53	-0.4
4,782,991	+		PFR28_04181	0.53	-0.6
4,782,991	+		PFR28_04181	0.53	+0.1
4,782,991	+		PFR28_04181	0.53	-0.2
4,782,991	+		PFR28_04181	0.53	+0.6
4,782,991	+		PFR28_04181	0.53	+1.4
4,782,991	+		PFR28_04181	0.53	+0.5
4,782,991	+		PFR28_04181	0.53	-1.4
4,782,992	-		PFR28_04181	0.53	+0.6
4,782,992	-		PFR28_04181	0.53	+0.4
4,782,992	-		PFR28_04181	0.53	-0.5
4,782,992	-		PFR28_04181	0.53	+0.5
4,782,992	-		PFR28_04181	0.53	+0.3
4,782,992	-		PFR28_04181	0.53	+0.0
4,783,017	+		PFR28_04181	0.57	+0.4
4,783,017	+		PFR28_04181	0.57	+0.1
4,783,017	+		PFR28_04181	0.57	-0.1
4,783,018	-		PFR28_04181	0.57	-0.0
4,783,018	-		PFR28_04181	0.57	-0.2
4,783,018	-		PFR28_04181	0.57	-0.2
4,783,018	-		PFR28_04181	0.57	-0.8
4,783,018	-		PFR28_04181	0.57	-0.2
4,783,018	-		PFR28_04181	0.57	+0.4
4,783,018	-		PFR28_04181	0.57	-0.0
4,783,018	-		PFR28_04181	0.57	+0.2
4,783,085	+		PFR28_04181	0.67	+0.2
4,783,086	-		PFR28_04181	0.67	-0.8
4,783,086	-		PFR28_04181	0.67	+0.1
4,783,108	+		PFR28_04181	0.70	-0.1
4,783,109	-		PFR28_04181	0.71	+0.6
4,783,161	+		PFR28_04181	0.78	-0.1
4,783,161	+		PFR28_04181	0.78	+0.3
4,783,161	+		PFR28_04181	0.78	+0.0
4,783,161	+		PFR28_04181	0.78	+0.8
4,783,162	-		PFR28_04181	0.78	-0.8
4,783,162	-		PFR28_04181	0.78	+0.2
4,783,162	-		PFR28_04181	0.78	+0.5
4,783,162	-		PFR28_04181	0.78	-0.1
4,783,162	-		PFR28_04181	0.78	+0.8
4,783,168	+		PFR28_04181	0.79	+0.9
4,783,168	+		PFR28_04181	0.79	+0.6
4,783,169	-		PFR28_04181	0.80	-0.0
4,783,169	-		PFR28_04181	0.80	+0.3
4,783,169	-		PFR28_04181	0.80	+0.4
4,783,169	-		PFR28_04181	0.80	-0.2
4,783,207	+		PFR28_04181	0.85	+0.0
4,783,207	+		PFR28_04181	0.85	-0.5
4,783,207	+		PFR28_04181	0.85	-0.6
4,783,208	-		PFR28_04181	0.85	-0.4
4,783,208	-		PFR28_04181	0.85	+0.0
4,783,208	-		PFR28_04181	0.85	+0.8
4,783,208	-		PFR28_04181	0.85	+0.8
4,783,225	+		PFR28_04181	0.88	+0.2
4,783,246	+				-0.3
4,783,246	+				+0.6
4,783,247	-				+0.3
4,783,247	-				+1.0
4,783,247	-				+0.2
4,783,248	+				+1.0
4,783,329	-				-0.1
4,783,329	-				+0.5
4,783,329	-				+0.2
4,783,329	-				-0.4
4,783,337	+				+0.2
4,783,337	+				+0.8
4,783,337	+				-0.9
4,783,337	+				-0.6
4,783,337	+				-1.2
4,783,337	+				-0.9
4,783,338	-				-0.1
4,783,338	-				-0.0
4,783,338	-				+0.7
4,783,338	-				+0.1
4,783,338	-				-0.4
4,783,338	-				-0.4
4,783,338	-				+0.2
4,783,338	-				+0.2
4,783,338	-				+1.2
4,783,338	-				+0.2
4,783,338	-				-0.5
4,783,338	-				-1.0
4,783,338	-				+0.7
4,783,381	+				+0.8
4,783,381	+				+0.5
4,783,382	-				+0.2
4,783,382	-				-0.6