Strain Fitness in Erwinia amylovora T8 around OLJFJH_18360

Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
3,853,147	-		OLJFJH_18350	0.86	+1.2
3,853,147	-		OLJFJH_18350	0.86	-0.2
3,853,173	+				+1.9
3,853,173	+				+1.0
3,853,207	-				-0.4
3,853,327	+				-1.8
3,853,327	+				+0.0
3,853,327	+				+0.2
3,853,327	+				-0.1
3,853,485	-				-2.1
3,853,531	-				-1.1
3,853,759	+				-1.1
3,853,759	+				-1.4
3,853,915	+		OLJFJH_18355	0.58	+0.3
3,853,915	+		OLJFJH_18355	0.58	-1.7
3,853,915	+		OLJFJH_18355	0.58	+0.1
3,853,915	+		OLJFJH_18355	0.58	-1.1
3,853,916	-		OLJFJH_18355	0.58	-2.2
3,853,917	+		OLJFJH_18355	0.59	-1.3
3,853,917	+		OLJFJH_18355	0.59	-0.6
3,853,917	+		OLJFJH_18355	0.59	-1.2
3,853,917	+		OLJFJH_18355	0.59	-0.5
3,853,917	+		OLJFJH_18355	0.59	-2.2
3,853,917	+		OLJFJH_18355	0.59	+0.9
3,853,918	-		OLJFJH_18355	0.59	+0.6
3,853,918	-		OLJFJH_18355	0.59	-1.6
3,853,918	-		OLJFJH_18355	0.59	-2.4
3,853,918	-		OLJFJH_18355	0.59	-0.8
3,853,918	-		OLJFJH_18355	0.59	-2.8
3,853,918	-		OLJFJH_18355	0.59	-2.0
3,853,919	+		OLJFJH_18355	0.60	-1.5
3,853,919	+		OLJFJH_18355	0.60	+0.4
3,853,919	+		OLJFJH_18355	0.60	-0.8
3,853,919	+		OLJFJH_18355	0.60	-1.9
3,853,919	+		OLJFJH_18355	0.60	-2.4
3,853,919	+		OLJFJH_18355	0.60	-2.0
3,853,919	+		OLJFJH_18355	0.60	-2.8
3,853,919	+		OLJFJH_18355	0.60	-0.4
3,853,919	+		OLJFJH_18355	0.60	-0.5
3,853,920	-		OLJFJH_18355	0.60	-1.8
3,853,920	-		OLJFJH_18355	0.60	-0.4
3,853,920	-		OLJFJH_18355	0.60	-1.7
3,853,920	-		OLJFJH_18355	0.60	-0.5
3,853,920	-		OLJFJH_18355	0.60	-0.1
3,853,920	-		OLJFJH_18355	0.60	-1.8
3,853,920	-		OLJFJH_18355	0.60	-2.4
3,853,920	-		OLJFJH_18355	0.60	-0.6
3,853,920	-		OLJFJH_18355	0.60	+0.4
3,853,968	+		OLJFJH_18355	0.78	-0.2
3,853,968	+		OLJFJH_18355	0.78	-0.0
3,854,020	+				-1.4
3,854,021	-				-3.9
3,854,054	+				-3.7
3,854,054	+				-3.5
3,854,055	-				-2.4
3,854,060	-				+0.0
3,854,182	+				+0.6
3,854,182	+				-2.6
3,854,183	-				-2.4
3,854,186	+				+0.9
3,854,187	-				-3.5
3,854,187	-				-3.6
3,854,187	-				-1.9
3,854,237	+		OLJFJH_18360	0.11	-1.1
3,854,237	+		OLJFJH_18360	0.11	-4.1
3,854,237	+		OLJFJH_18360	0.11	+0.3
3,854,237	+		OLJFJH_18360	0.11	-3.5
3,854,237	+		OLJFJH_18360	0.11	+1.3
3,854,238	-		OLJFJH_18360	0.11	-0.4
3,854,238	-		OLJFJH_18360	0.11	-1.2
3,854,242	-		OLJFJH_18360	0.12	-2.5
3,854,242	-		OLJFJH_18360	0.12	-2.4
3,854,242	-		OLJFJH_18360	0.12	-1.4
3,854,242	-		OLJFJH_18360	0.12	-3.0
3,854,242	-		OLJFJH_18360	0.12	-3.4
3,854,274	+		OLJFJH_18360	0.15	-3.2
3,854,278	+		OLJFJH_18360	0.15	-0.8
3,854,295	-		OLJFJH_18360	0.17	-0.8
3,854,328	-		OLJFJH_18360	0.20	-2.8
3,854,328	-		OLJFJH_18360	0.20	-2.7
3,854,392	+		OLJFJH_18360	0.26	-2.4
3,854,392	+		OLJFJH_18360	0.26	-2.5
3,854,393	-		OLJFJH_18360	0.27	-2.7
3,854,394	+		OLJFJH_18360	0.27	-1.7
3,854,397	-		OLJFJH_18360	0.27	-3.2
3,854,411	+		OLJFJH_18360	0.28	-1.6
3,854,412	-		OLJFJH_18360	0.28	-1.5
3,854,417	+		OLJFJH_18360	0.29	-1.0
3,854,451	-		OLJFJH_18360	0.32	-1.2
3,854,471	-		OLJFJH_18360	0.34	-1.0
3,854,471	-		OLJFJH_18360	0.34	-1.5
3,854,477	+		OLJFJH_18360	0.35	-0.9
3,854,481	+		OLJFJH_18360	0.35	-2.9
3,854,481	+		OLJFJH_18360	0.35	-2.7
3,854,483	+		OLJFJH_18360	0.35	-0.3
3,854,484	-		OLJFJH_18360	0.36	-3.1
3,854,499	+		OLJFJH_18360	0.37	-5.1
3,854,523	-		OLJFJH_18360	0.39	-1.3
3,854,561	+		OLJFJH_18360	0.43	-1.3
3,854,595	+		OLJFJH_18360	0.46	-2.9
3,854,596	-		OLJFJH_18360	0.47	-2.9
3,854,597	+		OLJFJH_18360	0.47	+0.9
3,854,598	-		OLJFJH_18360	0.47	-1.3
3,854,622	-		OLJFJH_18360	0.49	-3.9
3,854,658	-		OLJFJH_18360	0.53	+0.0
3,854,658	-		OLJFJH_18360	0.53	-1.9
3,854,667	-		OLJFJH_18360	0.54	-1.4
3,854,691	+		OLJFJH_18360	0.56	+0.6
3,854,691	+		OLJFJH_18360	0.56	-0.8
3,854,693	+		OLJFJH_18360	0.56	-1.6
3,854,720	+		OLJFJH_18360	0.59	-2.1
3,854,759	+		OLJFJH_18360	0.63	-0.6
3,854,978	+		OLJFJH_18360	0.84	-3.2
3,854,978	+		OLJFJH_18360	0.84	-2.6
3,854,986	+		OLJFJH_18360	0.85	-2.6
3,854,998	+		OLJFJH_18360	0.86	-2.1
3,854,999	-		OLJFJH_18360	0.86	-2.3
3,854,999	-		OLJFJH_18360	0.86	-3.3
3,855,030	+		OLJFJH_18360	0.89	-1.2
3,855,030	+		OLJFJH_18360	0.89	-2.6
3,855,030	+		OLJFJH_18360	0.89	-1.0
3,855,030	+		OLJFJH_18360	0.89	-0.2
3,855,031	-		OLJFJH_18360	0.89	-1.7
3,855,034	-		OLJFJH_18360	0.90	-2.4
3,855,072	+				-2.4
3,855,072	+				-1.4
3,855,073	-				-4.0
3,855,123	-				+0.1
3,855,134	-				-1.0
3,855,184	+				-0.4
3,855,248	+		OLJFJH_18365	0.15	-0.2
3,855,325	-		OLJFJH_18365	0.48	-2.6
3,855,345	+		OLJFJH_18365	0.57	-0.7
3,855,345	+		OLJFJH_18365	0.57	-1.4
3,855,392	+		OLJFJH_18365	0.77	+1.4
3,855,392	+		OLJFJH_18365	0.77	-0.9
3,855,476	-				-0.5
3,855,505	+				+0.9
3,855,506	-				+0.3
3,855,509	+				+1.6
3,855,543	+				-0.5
3,855,543	+				-0.2
3,855,543	+				+0.6
3,855,544	-				-0.6
3,855,622	+		OLJFJH_18370	0.18	-1.8
3,855,623	-		OLJFJH_18370	0.18	+0.2
3,855,655	+		OLJFJH_18370	0.23	-0.3
3,855,673	-		OLJFJH_18370	0.26	+0.8
3,855,714	-		OLJFJH_18370	0.33	-0.1
3,855,723	+		OLJFJH_18370	0.35	-0.3
3,855,925	-		OLJFJH_18370	0.69	+0.1
3,856,066	+				+2.5
3,856,066	+				-0.3
3,856,067	-				-1.0
3,856,097	+				-0.2
3,856,097	+				-0.4
3,856,097	+				+1.3
3,856,110	-				-1.0
3,856,110	-				-0.6
3,856,113	-				+0.7
3,856,127	-				-0.1
3,856,134	-				-1.7