Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_17800 and OLJFJH_17805 are separated by 99 nucleotides OLJFJH_17805 and OLJFJH_17810 overlap by 1 nucleotides OLJFJH_17810 and OLJFJH_17815 are separated by 55 nucleotides
OLJFJH_17800: OLJFJH_17800 - molecular chaperone HtpG, at 3,741,731 to 3,743,605
_17800
OLJFJH_17805: OLJFJH_17805 - recombination mediator RecR, at 3,743,705 to 3,744,310
_17805
OLJFJH_17810: OLJFJH_17810 - YbaB/EbfC family nucleoid-associated protein, at 3,744,310 to 3,744,639
_17810
OLJFJH_17815: OLJFJH_17815 - DNA polymerase III subunit gamma/tau, at 3,744,695 to 3,746,626
_17815
Position (kb) 3744
3745 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 3743.431 kb on - strand at 3743.467 kb on + strand at 3743.467 kb on + strand at 3743.527 kb on - strand at 3743.527 kb on - strand at 3743.610 kb on - strand at 3743.657 kb on + strand at 3743.821 kb on - strand, within OLJFJH_17805 at 3743.844 kb on + strand, within OLJFJH_17805 at 3743.844 kb on + strand, within OLJFJH_17805 at 3743.844 kb on + strand, within OLJFJH_17805 at 3743.845 kb on - strand, within OLJFJH_17805 at 3743.845 kb on - strand, within OLJFJH_17805 at 3743.845 kb on - strand, within OLJFJH_17805 at 3743.845 kb on - strand, within OLJFJH_17805 at 3743.990 kb on + strand, within OLJFJH_17805 at 3743.991 kb on - strand, within OLJFJH_17805 at 3744.244 kb on + strand, within OLJFJH_17805 at 3744.345 kb on + strand, within OLJFJH_17810 at 3744.409 kb on - strand, within OLJFJH_17810 at 3744.438 kb on + strand, within OLJFJH_17810 at 3744.462 kb on + strand, within OLJFJH_17810 at 3744.582 kb on + strand, within OLJFJH_17810 at 3744.639 kb on + strand at 3744.639 kb on + strand at 3744.639 kb on + strand at 3744.639 kb on + strand at 3744.639 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2 remove 3,743,431 - -1.0 3,743,467 + +0.6 3,743,467 + -0.5 3,743,527 - -1.3 3,743,527 - -3.3 3,743,610 - -2.4 3,743,657 + -1.8 3,743,821 - OLJFJH_17805 0.19 -1.5 3,743,844 + OLJFJH_17805 0.23 -0.5 3,743,844 + OLJFJH_17805 0.23 -0.3 3,743,844 + OLJFJH_17805 0.23 +0.9 3,743,845 - OLJFJH_17805 0.23 -2.0 3,743,845 - OLJFJH_17805 0.23 -0.4 3,743,845 - OLJFJH_17805 0.23 -0.9 3,743,845 - OLJFJH_17805 0.23 -1.7 3,743,990 + OLJFJH_17805 0.47 -1.1 3,743,991 - OLJFJH_17805 0.47 -0.6 3,744,244 + OLJFJH_17805 0.89 -2.1 3,744,345 + OLJFJH_17810 0.11 -2.1 3,744,409 - OLJFJH_17810 0.30 -1.6 3,744,438 + OLJFJH_17810 0.39 -2.3 3,744,462 + OLJFJH_17810 0.46 -2.0 3,744,582 + OLJFJH_17810 0.82 +1.3 3,744,639 + -0.8 3,744,639 + -1.8 3,744,639 + -0.1 3,744,639 + -0.2 3,744,639 + -1.6
Or see this region's nucleotide sequence