Strain Fitness in Erwinia amylovora T8 around OLJFJH_17320

Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
3,653,948	-				-1.3
3,654,013	-				+0.9
3,654,039	+				-0.5
3,654,097	+				-1.2
3,654,097	+				+0.5
3,654,097	+				-1.8
3,654,098	-				-0.2
3,654,098	-				-1.0
3,654,140	+				-1.0
3,654,175	+				-0.7
3,654,177	+				-0.8
3,654,177	+				+0.3
3,654,178	-				+0.9
3,654,208	+				+0.1
3,654,223	+				-0.0
3,654,295	-				+0.2
3,654,360	+				-1.8
3,654,405	+				-2.1
3,654,472	-				-1.5
3,654,472	-				-1.5
3,654,472	-				-1.7
3,654,474	-				+0.8
3,654,563	+				+1.7
3,654,580	+				+0.3
3,654,703	+				-0.2
3,654,709	+				+0.3
3,654,740	+				-0.1
3,654,741	-				-0.2
3,654,744	-				-1.7
3,654,752	+				-1.2
3,654,752	+				+0.3
3,654,753	-				-1.3
3,654,753	-				-1.1
3,654,762	+				+0.4
3,654,776	-				-0.2
3,654,807	+				-0.4
3,654,836	+				+0.9
3,654,842	+				-2.6
3,654,875	-				+0.6
3,654,880	-				-2.1
3,654,889	+				-1.8
3,654,890	-				-3.2
3,654,905	+				-0.2
3,654,943	-				-0.6
3,655,040	+		OLJFJH_17320	0.10	-2.3
3,655,040	+		OLJFJH_17320	0.10	-2.3
3,655,040	+		OLJFJH_17320	0.10	-2.3
3,655,040	+		OLJFJH_17320	0.10	-1.8
3,655,055	-		OLJFJH_17320	0.11	-2.5
3,655,192	+		OLJFJH_17320	0.21	-1.9
3,655,193	-		OLJFJH_17320	0.21	+0.7
3,655,193	-		OLJFJH_17320	0.21	+0.1
3,655,193	-		OLJFJH_17320	0.21	-1.7
3,655,193	-		OLJFJH_17320	0.21	-0.7
3,655,203	+		OLJFJH_17320	0.22	-1.2
3,655,238	+		OLJFJH_17320	0.24	-0.2
3,655,315	-		OLJFJH_17320	0.29	-1.6
3,655,315	-		OLJFJH_17320	0.29	-0.2
3,655,370	-		OLJFJH_17320	0.33	-2.2
3,655,452	+		OLJFJH_17320	0.39	-1.4
3,655,452	+		OLJFJH_17320	0.39	-0.2
3,655,452	+		OLJFJH_17320	0.39	-1.8
3,655,452	+		OLJFJH_17320	0.39	-1.5
3,655,452	+		OLJFJH_17320	0.39	-1.8
3,655,452	+		OLJFJH_17320	0.39	-2.2
3,655,452	+		OLJFJH_17320	0.39	-2.5
3,655,452	+		OLJFJH_17320	0.39	-1.0
3,655,453	-		OLJFJH_17320	0.39	-1.3
3,655,453	-		OLJFJH_17320	0.39	-2.6
3,655,453	-		OLJFJH_17320	0.39	-2.2
3,655,545	+		OLJFJH_17320	0.46	+0.0
3,655,545	+		OLJFJH_17320	0.46	-2.6
3,655,546	-		OLJFJH_17320	0.46	+0.1
3,655,546	-		OLJFJH_17320	0.46	-0.9
3,655,546	-		OLJFJH_17320	0.46	-0.2
3,655,951	+		OLJFJH_17320	0.74	-2.1
3,655,951	+		OLJFJH_17320	0.74	-0.1
3,655,951	+		OLJFJH_17320	0.74	+0.1
3,655,953	+		OLJFJH_17320	0.74	-2.1
3,655,953	+		OLJFJH_17320	0.74	-0.6
3,655,953	+		OLJFJH_17320	0.74	-0.6
3,655,954	-		OLJFJH_17320	0.74	+0.3
3,655,954	-		OLJFJH_17320	0.74	-1.7
3,655,954	-		OLJFJH_17320	0.74	+0.9
3,656,062	+		OLJFJH_17320	0.82	+0.1
3,656,146	+		OLJFJH_17320	0.88	-1.7
3,656,147	-		OLJFJH_17320	0.88	-1.9
3,656,170	+		OLJFJH_17320	0.89	-1.4
3,656,172	+		OLJFJH_17320	0.90	-1.9
3,656,172	+		OLJFJH_17320	0.90	+0.5
3,656,173	-		OLJFJH_17320	0.90	-1.9
3,656,317	+				-1.1
3,656,317	+				-1.1
3,656,351	-				-1.9
3,656,351	-				-0.1
3,656,353	+				+0.2
3,656,354	-				-0.1
3,656,354	-				+0.0
3,656,378	+				-0.2
3,656,378	+				-1.9
3,656,378	+				-1.8
3,656,378	+				-0.2
3,656,378	+				+1.9
3,656,378	+				-2.1
3,656,378	+				-1.6
3,656,378	+				-1.4
3,656,379	-				-1.2
3,656,379	-				-1.6
3,656,379	-				-1.8
3,656,379	-				-2.5
3,656,379	-				-2.3
3,656,379	-				-1.8
3,656,379	-				-0.4
3,656,379	-				+0.6
3,656,379	-				-1.6
3,656,379	-				-1.8
3,656,379	-				-1.6
3,656,379	-				-0.8
3,656,379	-				-1.4
3,656,379	-				-0.6
3,656,379	-				-1.2
3,656,379	-				-1.1
3,656,380	+				-1.8
3,656,380	+				-0.6
3,656,381	-				+0.1
3,656,546	+		OLJFJH_17325	0.22	-2.0
3,656,547	-		OLJFJH_17325	0.22	-2.0
3,656,587	+		OLJFJH_17325	0.26	-2.2
3,656,605	-		OLJFJH_17325	0.28	-2.2
3,656,762	+		OLJFJH_17325	0.44	-0.8
3,656,763	-		OLJFJH_17325	0.44	-1.7
3,656,763	-		OLJFJH_17325	0.44	+0.4
3,656,832	-		OLJFJH_17325	0.51	-2.0
3,656,858	-		OLJFJH_17325	0.53	-1.7
3,656,981	-		OLJFJH_17325	0.65	-0.8
3,656,981	-		OLJFJH_17325	0.65	-0.8
3,656,981	-		OLJFJH_17325	0.65	-1.0
3,657,020	-		OLJFJH_17325	0.69	-2.2
3,657,089	+		OLJFJH_17325	0.76	-0.1
3,657,090	-		OLJFJH_17325	0.76	-2.2
3,657,184	+		OLJFJH_17325	0.86	-1.6
3,657,224	-		OLJFJH_17325	0.90	-0.5
3,657,266	+				-2.6
3,657,266	+				-1.2
3,657,267	-				-1.2
3,657,267	-				+0.4
3,657,285	-				-1.0
3,657,285	-				+0.9