Strain Fitness in Erwinia amylovora T8 around OLJFJH_13600

Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
2,860,654	-				-0.3
2,860,654	-				+0.6
2,860,676	-				-1.5
2,860,720	+				+1.6
2,860,720	+				-0.4
2,860,721	-				+1.5
2,860,721	-				-0.5
2,860,726	-				+0.5
2,860,726	-				+1.5
2,860,780	+				-1.2
2,860,780	+				-0.8
2,860,781	-				+0.8
2,860,781	-				-0.5
2,860,781	-				+0.6
2,860,783	-				+0.5
2,860,962	+		OLJFJH_13595	0.13	+0.3
2,860,962	+		OLJFJH_13595	0.13	+0.1
2,860,963	-		OLJFJH_13595	0.14	-0.3
2,861,004	+		OLJFJH_13595	0.19	+1.5
2,861,009	+		OLJFJH_13595	0.20	-0.3
2,861,009	+		OLJFJH_13595	0.20	+0.1
2,861,096	-		OLJFJH_13595	0.33	-0.9
2,861,117	+		OLJFJH_13595	0.36	+0.2
2,861,117	+		OLJFJH_13595	0.36	-1.2
2,861,117	+		OLJFJH_13595	0.36	-0.7
2,861,117	+		OLJFJH_13595	0.36	+0.2
2,861,117	+		OLJFJH_13595	0.36	-0.0
2,861,118	-		OLJFJH_13595	0.36	-0.6
2,861,173	+		OLJFJH_13595	0.44	-1.9
2,861,418	+		OLJFJH_13595	0.79	+0.4
2,861,450	+		OLJFJH_13595	0.83	-0.0
2,861,451	-		OLJFJH_13595	0.83	+1.4
2,861,451	-		OLJFJH_13595	0.83	+0.4
2,861,475	+		OLJFJH_13595	0.87	+0.2
2,861,476	-		OLJFJH_13595	0.87	+3.3
2,861,508	+				+1.0
2,861,530	+				+0.9
2,861,613	+				-1.2
2,861,614	-				+0.7
2,861,632	+				-1.1
2,861,632	+				-0.6
2,861,652	+				+1.1
2,861,652	+				+0.7
2,861,677	+				-1.0
2,861,678	-				+0.1
2,861,678	-				-1.2
2,861,711	+				-0.3
2,861,810	-				+0.6
2,861,810	-				+0.1
2,861,810	-				-0.6
2,861,810	-				+2.1
2,861,856	-		OLJFJH_13600	0.10	-0.7
2,861,856	-		OLJFJH_13600	0.10	-0.4
2,862,084	+		OLJFJH_13600	0.22	-1.1
2,862,089	-		OLJFJH_13600	0.22	-1.3
2,862,089	-		OLJFJH_13600	0.22	-1.6
2,862,114	+		OLJFJH_13600	0.24	+0.1
2,862,114	+		OLJFJH_13600	0.24	+0.1
2,862,115	-		OLJFJH_13600	0.24	-2.4
2,862,115	-		OLJFJH_13600	0.24	-2.0
2,862,351	+		OLJFJH_13600	0.36	-1.7
2,862,351	+		OLJFJH_13600	0.36	-1.8
2,862,351	+		OLJFJH_13600	0.36	+0.1
2,862,351	+		OLJFJH_13600	0.36	-4.6
2,862,352	-		OLJFJH_13600	0.36	-1.2
2,862,352	-		OLJFJH_13600	0.36	-2.5
2,862,352	-		OLJFJH_13600	0.36	-2.0
2,862,352	-		OLJFJH_13600	0.36	-1.0
2,862,355	+		OLJFJH_13600	0.36	-2.0
2,862,657	+		OLJFJH_13600	0.52	-1.9
2,862,820	+		OLJFJH_13600	0.60	-1.3
2,862,837	+		OLJFJH_13600	0.61	-2.2
2,862,838	-		OLJFJH_13600	0.61	-2.5
2,862,838	-		OLJFJH_13600	0.61	-0.7
2,862,842	-		OLJFJH_13600	0.61	-3.2
2,862,894	+		OLJFJH_13600	0.64	-0.1
2,862,894	+		OLJFJH_13600	0.64	-0.8
2,862,894	+		OLJFJH_13600	0.64	-3.2
2,862,894	+		OLJFJH_13600	0.64	-1.2
2,862,895	-		OLJFJH_13600	0.64	+0.0
2,862,895	-		OLJFJH_13600	0.64	-2.5
2,862,895	-		OLJFJH_13600	0.64	-0.2
2,862,895	-		OLJFJH_13600	0.64	-2.0
2,862,957	+		OLJFJH_13600	0.67	-1.6
2,863,168	-		OLJFJH_13600	0.78	-0.6
2,863,249	+		OLJFJH_13600	0.82	-1.0
2,863,331	-		OLJFJH_13600	0.86	-1.1
2,863,463	-				+0.3
2,863,520	+				-1.5
2,863,564	+				-0.3
2,863,565	-				+0.8
2,863,598	-				+0.2
2,863,598	-				-0.2
2,863,703	-				-0.3
2,863,867	+				+1.1
2,863,867	+				-1.0
2,863,955	-		OLJFJH_13605	0.12	-2.3
2,864,007	+		OLJFJH_13605	0.14	-1.2
2,864,008	-		OLJFJH_13605	0.14	-0.6
2,864,023	-		OLJFJH_13605	0.15	+0.4
2,864,053	+		OLJFJH_13605	0.16	+0.2
2,864,169	+		OLJFJH_13605	0.21	-0.2
2,864,185	+		OLJFJH_13605	0.22	-0.1
2,864,248	+		OLJFJH_13605	0.25	-0.8
2,864,248	+		OLJFJH_13605	0.25	+0.0
2,864,249	-		OLJFJH_13605	0.25	+0.7
2,864,251	+		OLJFJH_13605	0.25	-2.3
2,864,253	+		OLJFJH_13605	0.25	-1.4
2,864,253	+		OLJFJH_13605	0.25	-0.7
2,864,254	-		OLJFJH_13605	0.25	+0.0
2,864,254	-		OLJFJH_13605	0.25	-0.7
2,864,354	-		OLJFJH_13605	0.29	-0.0
2,864,410	+		OLJFJH_13605	0.32	-0.8
2,864,411	-		OLJFJH_13605	0.32	+0.7
2,864,467	+		OLJFJH_13605	0.34	-1.7
2,864,594	-		OLJFJH_13605	0.40	+0.4