Strain Fitness in Erwinia amylovora T8 around OLJFJH_12785
Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2 |
|---|---|---|---|---|---|
| remove | |||||
| 2,693,739 | + | OLJFJH_12780 | 0.59 | -1.9 | |
| 2,693,740 | - | OLJFJH_12780 | 0.59 | -2.0 | |
| 2,693,918 | + | OLJFJH_12780 | 0.68 | +0.9 | |
| 2,693,947 | - | OLJFJH_12780 | 0.69 | -1.7 | |
| 2,694,124 | - | OLJFJH_12780 | 0.78 | -0.6 | |
| 2,694,124 | - | OLJFJH_12780 | 0.78 | +0.7 | |
| 2,694,128 | + | OLJFJH_12780 | 0.78 | -0.8 | |
| 2,694,128 | + | OLJFJH_12780 | 0.78 | -0.3 | |
| 2,694,128 | + | OLJFJH_12780 | 0.78 | -0.2 | |
| 2,694,129 | - | OLJFJH_12780 | 0.78 | -1.2 | |
| 2,694,169 | - | OLJFJH_12780 | 0.80 | -0.4 | |
| 2,694,767 | + | OLJFJH_12785 | 0.46 | -1.2 | |
| 2,694,866 | - | OLJFJH_12785 | 0.71 | -1.3 | |
| 2,694,893 | - | OLJFJH_12785 | 0.78 | -1.5 | |
| 2,694,972 | + | -0.9 | |||
| 2,694,972 | + | -1.3 | |||
| 2,694,973 | - | -1.4 |
Or see this region's nucleotide sequence