Strain Fitness in Erwinia amylovora T8 around OLJFJH_12540

Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
2,636,936	+				-1.0
2,637,011	-				-1.3
2,637,082	+				-1.0
2,637,137	+				+0.8
2,637,137	+				-0.1
2,637,138	-				+0.4
2,637,138	-				-0.7
2,637,361	-		OLJFJH_12530	0.67	-0.7
2,637,416	+		OLJFJH_12530	0.82	-0.6
2,637,421	+		OLJFJH_12530	0.83	+0.7
2,637,421	+		OLJFJH_12530	0.83	+0.9
2,637,421	+		OLJFJH_12530	0.83	-0.2
2,637,421	+		OLJFJH_12530	0.83	+1.7
2,637,422	-		OLJFJH_12530	0.84	+0.4
2,637,422	-		OLJFJH_12530	0.84	+0.5
2,637,422	-		OLJFJH_12530	0.84	+0.4
2,637,465	+				+0.7
2,637,482	-				+0.8
2,637,482	-				+0.3
2,637,485	+				+0.6
2,637,485	+				+1.0
2,637,486	-				+0.6
2,637,620	-		OLJFJH_12535	0.32	-0.9
2,637,620	-		OLJFJH_12535	0.32	-1.3
2,637,620	-		OLJFJH_12535	0.32	-2.9
2,637,620	-		OLJFJH_12535	0.32	-2.9
2,637,871	+				-1.9
2,637,872	-				-3.6
2,637,887	-				-1.6
2,637,888	+				+0.7
2,637,888	+				-3.4
2,637,888	+				-2.7
2,637,888	+				-2.3
2,637,888	+				-2.3
2,637,888	+				-2.9
2,637,888	+				-2.8
2,637,888	+				-1.7
2,637,888	+				-1.2
2,637,888	+				-1.9
2,637,889	-				+0.1
2,637,889	-				-1.4
2,637,889	-				+0.2
2,637,889	-				-2.6
2,637,889	-				-1.5
2,637,889	-				+0.6
2,637,889	-				-3.3
2,637,889	-				-2.4
2,637,889	-				-1.9
2,637,889	-				-3.4
2,637,889	-				-2.6
2,637,889	-				-3.2
2,637,889	-				-3.0
2,637,889	-				-3.3
2,637,892	+				-2.2
2,637,893	-				-2.8
2,637,893	-				-2.6
2,637,893	-				-2.2
2,637,909	-				-0.6
2,637,909	-				-0.9
2,637,911	+				-2.0
2,637,912	-				-2.4
2,637,912	-				-0.1
2,637,912	-				+0.1
2,637,912	-				+0.3
2,637,915	+				-2.4
2,638,053	+		OLJFJH_12540	0.10	-2.9
2,638,053	+		OLJFJH_12540	0.10	-1.1
2,638,053	+		OLJFJH_12540	0.10	-1.6
2,638,054	-		OLJFJH_12540	0.10	-1.3
2,638,056	-		OLJFJH_12540	0.10	-0.4
2,638,156	-		OLJFJH_12540	0.18	-3.0
2,638,156	-		OLJFJH_12540	0.18	-1.1
2,638,363	-		OLJFJH_12540	0.32	-2.7
2,638,437	-		OLJFJH_12540	0.38	-1.6
2,638,473	+		OLJFJH_12540	0.40	-2.3
2,638,473	+		OLJFJH_12540	0.40	-0.9
2,638,473	+		OLJFJH_12540	0.40	-2.8
2,638,473	+		OLJFJH_12540	0.40	-1.9
2,638,475	+		OLJFJH_12540	0.40	-0.4
2,638,475	+		OLJFJH_12540	0.40	-1.9
2,638,476	-		OLJFJH_12540	0.40	-2.1
2,638,513	-		OLJFJH_12540	0.43	-2.4
2,638,697	+		OLJFJH_12540	0.56	-1.7
2,638,697	+		OLJFJH_12540	0.56	-2.4
2,638,701	+		OLJFJH_12540	0.56	-1.9
2,638,701	+		OLJFJH_12540	0.56	-3.1
2,638,701	+		OLJFJH_12540	0.56	-1.8
2,638,702	-		OLJFJH_12540	0.56	-2.6
2,638,702	-		OLJFJH_12540	0.56	-1.1
2,638,927	-		OLJFJH_12540	0.72	-1.8
2,638,966	-		OLJFJH_12540	0.75	-1.3
2,638,966	-		OLJFJH_12540	0.75	-1.9
2,638,968	+		OLJFJH_12540	0.75	-2.4
2,638,968	+		OLJFJH_12540	0.75	-0.8
2,638,968	+		OLJFJH_12540	0.75	-3.8
2,638,968	+		OLJFJH_12540	0.75	+0.6
2,638,969	-		OLJFJH_12540	0.75	-1.1
2,639,030	+		OLJFJH_12540	0.80	-0.8
2,639,030	+		OLJFJH_12540	0.80	-3.1
2,639,030	+		OLJFJH_12540	0.80	-0.9
2,639,106	-		OLJFJH_12540	0.85	-1.4
2,639,106	-		OLJFJH_12540	0.85	-2.5
2,639,293	+				-1.1
2,639,299	-				-2.2
2,639,304	+				+0.2
2,639,305	-				-1.6
2,639,382	+				+2.0
2,639,423	+				-0.4
2,639,424	-				+1.4
2,639,433	+				+1.6
2,639,482	-				-0.9
2,639,487	+				-1.6
2,639,583	+				+0.0
2,639,587	+				+0.6
2,639,674	+				+0.2
2,639,675	-				-0.1
2,639,675	-				-0.0
2,639,803	+		OLJFJH_12545	0.25	+0.7
2,639,803	+		OLJFJH_12545	0.25	+0.4
2,639,804	-		OLJFJH_12545	0.25	+0.8
2,640,104	-		OLJFJH_12545	0.61	-1.0
2,640,122	-		OLJFJH_12545	0.63	-1.1