Strain Fitness in Erwinia amylovora T8 around OLJFJH_10565

Experiment: Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:cocktail;Temp:17;Samp:22-2
2,183,935	+		OLJFJH_10560	0.36	-1.1
2,184,004	+		OLJFJH_10560	0.40	+1.9
2,184,005	-		OLJFJH_10560	0.40	-0.8
2,184,005	-		OLJFJH_10560	0.40	+1.8
2,184,005	-		OLJFJH_10560	0.40	-0.8
2,184,155	+		OLJFJH_10560	0.50	-0.2
2,184,156	-		OLJFJH_10560	0.50	-0.8
2,184,175	+		OLJFJH_10560	0.52	-0.7
2,184,176	-		OLJFJH_10560	0.52	-1.8
2,184,176	-		OLJFJH_10560	0.52	-0.9
2,184,176	-		OLJFJH_10560	0.52	-0.3
2,184,210	-		OLJFJH_10560	0.54	-0.6
2,184,210	-		OLJFJH_10560	0.54	+0.2
2,184,298	+		OLJFJH_10560	0.60	-0.5
2,184,385	+		OLJFJH_10560	0.65	-0.8
2,184,386	-		OLJFJH_10560	0.65	-1.4
2,184,656	+		OLJFJH_10560	0.83	-1.0
2,184,777	+				-0.3
2,184,777	+				-0.8
2,184,915	-				-0.5
2,184,945	-				-1.0
2,184,948	+				-0.3
2,184,955	-				-0.7
2,184,999	-				-2.2
2,184,999	-				-2.3
2,185,022	-				-2.3
2,185,124	-				-0.5
2,185,128	+		OLJFJH_10565	0.10	-0.2
2,185,199	-		OLJFJH_10565	0.14	-1.8
2,185,200	+		OLJFJH_10565	0.14	-2.9
2,185,200	+		OLJFJH_10565	0.14	-1.2
2,185,201	-		OLJFJH_10565	0.14	-1.4
2,185,201	-		OLJFJH_10565	0.14	-1.0
2,185,201	-		OLJFJH_10565	0.14	-2.9
2,185,201	-		OLJFJH_10565	0.14	-1.7
2,185,252	+		OLJFJH_10565	0.16	+0.4
2,185,252	+		OLJFJH_10565	0.16	-0.8
2,185,316	-		OLJFJH_10565	0.19	+0.3
2,185,349	+		OLJFJH_10565	0.21	+0.4
2,185,433	+		OLJFJH_10565	0.25	-1.4
2,185,434	-		OLJFJH_10565	0.25	-3.3
2,185,443	+		OLJFJH_10565	0.25	-0.9
2,185,444	-		OLJFJH_10565	0.25	-1.6
2,185,522	+		OLJFJH_10565	0.29	-0.2
2,185,523	-		OLJFJH_10565	0.29	-0.8
2,185,956	+		OLJFJH_10565	0.50	-2.8
2,185,956	+		OLJFJH_10565	0.50	-1.1
2,185,957	-		OLJFJH_10565	0.50	-0.5
2,185,957	-		OLJFJH_10565	0.50	-2.1
2,185,957	-		OLJFJH_10565	0.50	+0.7
2,186,078	-		OLJFJH_10565	0.56	-0.2
2,186,120	-		OLJFJH_10565	0.58	-1.3
2,186,162	+		OLJFJH_10565	0.60	-0.3
2,186,284	-		OLJFJH_10565	0.66	-0.6
2,186,480	+		OLJFJH_10565	0.76	-2.3
2,186,480	+		OLJFJH_10565	0.76	-2.3
2,186,481	-		OLJFJH_10565	0.76	-3.1
2,186,481	-		OLJFJH_10565	0.76	-3.9
2,186,514	+		OLJFJH_10565	0.77	-1.9
2,186,515	-		OLJFJH_10565	0.77	-1.1
2,186,515	-		OLJFJH_10565	0.77	-1.8
2,186,520	+		OLJFJH_10565	0.78	-1.8
2,186,520	+		OLJFJH_10565	0.78	+0.2
2,186,521	-		OLJFJH_10565	0.78	-1.7
2,186,604	+		OLJFJH_10565	0.82	-2.3
2,186,605	-		OLJFJH_10565	0.82	-1.5
2,186,682	-		OLJFJH_10565	0.85	+1.3
2,186,697	+		OLJFJH_10565	0.86	-1.1
2,186,698	-		OLJFJH_10565	0.86	-1.5
2,186,856	+				+0.4
2,186,856	+				-0.0
2,186,861	-				-2.1
2,186,875	+				-0.5
2,186,875	+				-1.2
2,186,918	+				-1.0
2,186,961	+				-2.0
2,186,961	+				+1.0
2,186,961	+				-1.8
2,186,962	-				+0.9
2,187,007	-				+0.7
2,187,008	+				-0.7
2,187,008	+				+0.5
2,187,008	+				+0.4
2,187,008	+				-1.9
2,187,008	+				-1.2
2,187,008	+				-1.6
2,187,009	-				-0.1
2,187,009	-				+0.5
2,187,009	-				-1.8
2,187,009	-				+0.1
2,187,009	-				-0.0
2,187,085	+				+0.4
2,187,085	+				-1.3
2,187,089	-				+0.2
2,187,089	-				-1.0
2,187,096	+				-1.0
2,187,097	-				+0.1
2,187,243	+				+1.0
2,187,244	-				+1.1
2,187,244	-				+1.8
2,187,717	+		OLJFJH_10570	0.27	+0.9
2,187,717	+		OLJFJH_10570	0.27	-0.0
2,187,804	-		OLJFJH_10570	0.31	-0.3
2,187,825	+		OLJFJH_10570	0.32	-1.4
2,187,826	-		OLJFJH_10570	0.32	+1.6
2,187,831	+		OLJFJH_10570	0.33	+0.7
2,187,832	-		OLJFJH_10570	0.33	-0.8
2,187,832	-		OLJFJH_10570	0.33	+0.0